Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.23■□□□□ 0.99
CAPN3P20807 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CAPN3P20807 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CAPN3P20807 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CAPN3P20807 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.23■□□□□ 0.99
CAPN3P20807 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CAPN3P20807 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CAPN3P20807 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CAPN3P20807 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CAPN3P20807 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CAPN3P20807 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
CAPN3P20807 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CAPN3P20807 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CAPN3P20807 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CAPN3P20807 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CAPN3P20807 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CAPN3P20807 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CAPN3P20807 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CAPN3P20807 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CAPN3P20807 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.21■□□□□ 0.99
CAPN3P20807 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.21■□□□□ 0.99
CAPN3P20807 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.21■□□□□ 0.99
CAPN3P20807 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.21■□□□□ 0.99
CAPN3P20807 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.21■□□□□ 0.99
CAPN3P20807 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CAPN3P20807 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.2■□□□□ 0.98
CAPN3P20807 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CAPN3P20807 MIR638-201ENST00000385237 100 ntBASIC21.2■□□□□ 0.98
CAPN3P20807 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.2■□□□□ 0.98
CAPN3P20807 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CAPN3P20807 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.2■□□□□ 0.98
CAPN3P20807 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CAPN3P20807 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CAPN3P20807 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CAPN3P20807 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.19■□□□□ 0.98
CAPN3P20807 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CAPN3P20807 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CAPN3P20807 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.19■□□□□ 0.98
CAPN3P20807 KRT125P-201ENST00000546827 989 ntBASIC21.19■□□□□ 0.98
CAPN3P20807 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CAPN3P20807 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CAPN3P20807 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.19■□□□□ 0.98
CAPN3P20807 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CAPN3P20807 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CAPN3P20807 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CAPN3P20807 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CAPN3P20807 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CAPN3P20807 AC144652.1-201ENST00000609974 1624 ntBASIC21.18■□□□□ 0.98
CAPN3P20807 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CAPN3P20807 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.17■□□□□ 0.98
CAPN3P20807 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CAPN3P20807 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CAPN3P20807 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.17■□□□□ 0.98
CAPN3P20807 FBXW4P1-201ENST00000426721 2239 ntBASIC21.17■□□□□ 0.98
CAPN3P20807 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.17■□□□□ 0.98
CAPN3P20807 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CAPN3P20807 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN3P20807 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.16■□□□□ 0.98
CAPN3P20807 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN3P20807 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN3P20807 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.16■□□□□ 0.98
CAPN3P20807 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.16■□□□□ 0.98
CAPN3P20807 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.16■□□□□ 0.98
CAPN3P20807 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.16■□□□□ 0.98
CAPN3P20807 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN3P20807 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN3P20807 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CAPN3P20807 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
CAPN3P20807 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CAPN3P20807 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CAPN3P20807 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CAPN3P20807 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CAPN3P20807 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CAPN3P20807 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CAPN3P20807 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CAPN3P20807 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CAPN3P20807 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.15■□□□□ 0.98
CAPN3P20807 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.15■□□□□ 0.98
CAPN3P20807 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.15■□□□□ 0.98
CAPN3P20807 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CAPN3P20807 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CAPN3P20807 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CAPN3P20807 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CAPN3P20807 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CAPN3P20807 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.14■□□□□ 0.98
CAPN3P20807 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CAPN3P20807 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CAPN3P20807 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CAPN3P20807 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.14■□□□□ 0.97
CAPN3P20807 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.14■□□□□ 0.97
CAPN3P20807 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.14■□□□□ 0.97
CAPN3P20807 AL139246.5-201ENST00000606645 996 ntBASIC21.14■□□□□ 0.97
CAPN3P20807 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.14■□□□□ 0.97
CAPN3P20807 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CAPN3P20807 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.14■□□□□ 0.97
CAPN3P20807 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CAPN3P20807 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.13■□□□□ 0.97
CAPN3P20807 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CAPN3P20807 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CAPN3P20807 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms