Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.3■□□□□ 0.68
RAB3BP20337 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB3BP20337 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RAB3BP20337 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
RAB3BP20337 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB3BP20337 FAM99A-202ENST00000538190 1989 ntBASIC19.3■□□□□ 0.68
RAB3BP20337 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.3■□□□□ 0.68
RAB3BP20337 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB3BP20337 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB3BP20337 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB3BP20337 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB3BP20337 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
RAB3BP20337 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB3BP20337 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
RAB3BP20337 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB3BP20337 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RAB3BP20337 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.29■□□□□ 0.68
RAB3BP20337 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB3BP20337 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.28■□□□□ 0.68
RAB3BP20337 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB3BP20337 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
RAB3BP20337 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB3BP20337 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAB3BP20337 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB3BP20337 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
RAB3BP20337 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB3BP20337 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB3BP20337 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB3BP20337 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.28■□□□□ 0.68
RAB3BP20337 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
RAB3BP20337 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB3BP20337 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.28■□□□□ 0.68
RAB3BP20337 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
RAB3BP20337 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB3BP20337 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB3BP20337 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.27■□□□□ 0.68
RAB3BP20337 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB3BP20337 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
RAB3BP20337 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB3BP20337 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.27■□□□□ 0.68
RAB3BP20337 MIR7108-201ENST00000614319 87 ntBASIC19.27■□□□□ 0.68
RAB3BP20337 AC010542.4-201ENST00000563151 1910 ntBASIC19.27■□□□□ 0.67
RAB3BP20337 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.27■□□□□ 0.67
RAB3BP20337 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RAB3BP20337 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB3BP20337 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.26■□□□□ 0.67
RAB3BP20337 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RAB3BP20337 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB3BP20337 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB3BP20337 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB3BP20337 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
RAB3BP20337 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RAB3BP20337 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RAB3BP20337 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
RAB3BP20337 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
RAB3BP20337 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB3BP20337 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3BP20337 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3BP20337 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.25■□□□□ 0.67
RAB3BP20337 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3BP20337 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3BP20337 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3BP20337 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.25■□□□□ 0.67
RAB3BP20337 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3BP20337 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3BP20337 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3BP20337 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3BP20337 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3BP20337 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.25■□□□□ 0.67
RAB3BP20337 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3BP20337 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3BP20337 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RAB3BP20337 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3BP20337 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAB3BP20337 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.24■□□□□ 0.67
RAB3BP20337 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.24■□□□□ 0.67
RAB3BP20337 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
RAB3BP20337 DUX4L9-201ENST00000449051 1259 ntBASIC19.24■□□□□ 0.67
RAB3BP20337 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.24■□□□□ 0.67
RAB3BP20337 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB3BP20337 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
RAB3BP20337 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
RAB3BP20337 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
RAB3BP20337 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RAB3BP20337 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.24■□□□□ 0.67
RAB3BP20337 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.23■□□□□ 0.67
RAB3BP20337 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAB3BP20337 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.23■□□□□ 0.67
RAB3BP20337 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB3BP20337 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.23■□□□□ 0.67
RAB3BP20337 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.23■□□□□ 0.67
RAB3BP20337 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB3BP20337 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
RAB3BP20337 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB3BP20337 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB3BP20337 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
RAB3BP20337 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.22■□□□□ 0.67
RAB3BP20337 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3BP20337 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3BP20337 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms