Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
TNFRSF1BP20333 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
TNFRSF1BP20333 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
TNFRSF1BP20333 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNFRSF1BP20333 FBXW4P1-201ENST00000426721 2239 ntBASIC20.48■□□□□ 0.87
TNFRSF1BP20333 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNFRSF1BP20333 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.48■□□□□ 0.87
TNFRSF1BP20333 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.48■□□□□ 0.87
TNFRSF1BP20333 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.48■□□□□ 0.87
TNFRSF1BP20333 AC137630.3-201ENST00000607245 391 ntBASIC20.48■□□□□ 0.87
TNFRSF1BP20333 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNFRSF1BP20333 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNFRSF1BP20333 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNFRSF1BP20333 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNFRSF1BP20333 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNFRSF1BP20333 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.47■□□□□ 0.87
TNFRSF1BP20333 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.47■□□□□ 0.87
TNFRSF1BP20333 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNFRSF1BP20333 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
TNFRSF1BP20333 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
TNFRSF1BP20333 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.47■□□□□ 0.87
TNFRSF1BP20333 AL031848.2-201ENST00000607670 837 ntBASIC20.47■□□□□ 0.87
TNFRSF1BP20333 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TNFRSF1BP20333 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNFRSF1BP20333 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.47■□□□□ 0.87
TNFRSF1BP20333 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TNFRSF1BP20333 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
TNFRSF1BP20333 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNFRSF1BP20333 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
TNFRSF1BP20333 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNFRSF1BP20333 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNFRSF1BP20333 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.46■□□□□ 0.87
TNFRSF1BP20333 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
TNFRSF1BP20333 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
TNFRSF1BP20333 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
TNFRSF1BP20333 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
TNFRSF1BP20333 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TNFRSF1BP20333 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TNFRSF1BP20333 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TNFRSF1BP20333 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.45■□□□□ 0.86
TNFRSF1BP20333 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.45■□□□□ 0.86
TNFRSF1BP20333 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TNFRSF1BP20333 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TNFRSF1BP20333 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.45■□□□□ 0.86
TNFRSF1BP20333 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.45■□□□□ 0.86
TNFRSF1BP20333 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.45■□□□□ 0.86
TNFRSF1BP20333 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.45■□□□□ 0.86
TNFRSF1BP20333 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.45■□□□□ 0.86
TNFRSF1BP20333 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TNFRSF1BP20333 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.45■□□□□ 0.86
TNFRSF1BP20333 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TNFRSF1BP20333 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TNFRSF1BP20333 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TNFRSF1BP20333 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TNFRSF1BP20333 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TNFRSF1BP20333 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
TNFRSF1BP20333 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TNFRSF1BP20333 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.44■□□□□ 0.86
TNFRSF1BP20333 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.44■□□□□ 0.86
TNFRSF1BP20333 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TNFRSF1BP20333 LINC01529-204ENST00000636474 1715 ntBASIC20.44■□□□□ 0.86
TNFRSF1BP20333 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.44■□□□□ 0.86
TNFRSF1BP20333 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TNFRSF1BP20333 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.44■□□□□ 0.86
TNFRSF1BP20333 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.44■□□□□ 0.86
TNFRSF1BP20333 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TNFRSF1BP20333 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TNFRSF1BP20333 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TNFRSF1BP20333 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TNFRSF1BP20333 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TNFRSF1BP20333 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TNFRSF1BP20333 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TNFRSF1BP20333 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TNFRSF1BP20333 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TNFRSF1BP20333 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TNFRSF1BP20333 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
TNFRSF1BP20333 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.42■□□□□ 0.86
TNFRSF1BP20333 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.42■□□□□ 0.86
TNFRSF1BP20333 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
TNFRSF1BP20333 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TNFRSF1BP20333 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TNFRSF1BP20333 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.42■□□□□ 0.86
TNFRSF1BP20333 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TNFRSF1BP20333 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.42■□□□□ 0.86
TNFRSF1BP20333 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TNFRSF1BP20333 AC005703.6-201ENST00000623265 1329 ntBASIC20.42■□□□□ 0.86
TNFRSF1BP20333 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TNFRSF1BP20333 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TNFRSF1BP20333 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
TNFRSF1BP20333 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TNFRSF1BP20333 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.41■□□□□ 0.86
TNFRSF1BP20333 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
TNFRSF1BP20333 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.41■□□□□ 0.86
TNFRSF1BP20333 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TNFRSF1BP20333 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TNFRSF1BP20333 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TNFRSF1BP20333 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.41■□□□□ 0.86
TNFRSF1BP20333 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.41■□□□□ 0.86
TNFRSF1BP20333 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TNFRSF1BP20333 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms