Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
THBS1P07996 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
THBS1P07996 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
THBS1P07996 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
THBS1P07996 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
THBS1P07996 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.31■□□□□ 0.84
THBS1P07996 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.31■□□□□ 0.84
THBS1P07996 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
THBS1P07996 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
THBS1P07996 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
THBS1P07996 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
THBS1P07996 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
THBS1P07996 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
THBS1P07996 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
THBS1P07996 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.3■□□□□ 0.84
THBS1P07996 AC019069.1-201ENST00000610008 1333 ntBASIC20.3■□□□□ 0.84
THBS1P07996 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
THBS1P07996 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.3■□□□□ 0.84
THBS1P07996 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
THBS1P07996 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
THBS1P07996 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
THBS1P07996 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.3■□□□□ 0.84
THBS1P07996 AL499627.2-201ENST00000606283 725 ntBASIC20.3■□□□□ 0.84
THBS1P07996 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
THBS1P07996 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
THBS1P07996 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
THBS1P07996 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.3■□□□□ 0.84
THBS1P07996 LINC01960-201ENST00000563759 1884 ntBASIC20.3■□□□□ 0.84
THBS1P07996 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
THBS1P07996 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
THBS1P07996 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.29■□□□□ 0.84
THBS1P07996 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
THBS1P07996 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
THBS1P07996 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
THBS1P07996 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.29■□□□□ 0.84
THBS1P07996 AC241377.3-202ENST00000626088 1088 ntBASIC20.29■□□□□ 0.84
THBS1P07996 AC241585.3-202ENST00000628937 1088 ntBASIC20.29■□□□□ 0.84
THBS1P07996 AC245100.8-202ENST00000629247 1058 ntBASIC20.29■□□□□ 0.84
THBS1P07996 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
THBS1P07996 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
THBS1P07996 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
THBS1P07996 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
THBS1P07996 AC139530.1-201ENST00000575312 1977 ntBASIC20.28■□□□□ 0.84
THBS1P07996 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
THBS1P07996 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.28■□□□□ 0.84
THBS1P07996 AC004687.1-201ENST00000579003 1625 ntBASIC20.28■□□□□ 0.84
THBS1P07996 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
THBS1P07996 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
THBS1P07996 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
THBS1P07996 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
THBS1P07996 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.28■□□□□ 0.84
THBS1P07996 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
THBS1P07996 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.28■□□□□ 0.84
THBS1P07996 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.28■□□□□ 0.84
THBS1P07996 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
THBS1P07996 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
THBS1P07996 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
THBS1P07996 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
THBS1P07996 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
THBS1P07996 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
THBS1P07996 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
THBS1P07996 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
THBS1P07996 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
THBS1P07996 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
THBS1P07996 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
THBS1P07996 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
THBS1P07996 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
THBS1P07996 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
THBS1P07996 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.27■□□□□ 0.84
THBS1P07996 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
THBS1P07996 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
THBS1P07996 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
THBS1P07996 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
THBS1P07996 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
THBS1P07996 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
THBS1P07996 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.27■□□□□ 0.83
THBS1P07996 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
THBS1P07996 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
THBS1P07996 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
THBS1P07996 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
THBS1P07996 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
THBS1P07996 AC092053.2-201ENST00000640557 1818 ntBASIC20.26■□□□□ 0.83
THBS1P07996 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
THBS1P07996 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.26■□□□□ 0.83
THBS1P07996 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.26■□□□□ 0.83
THBS1P07996 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.26■□□□□ 0.83
THBS1P07996 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.26■□□□□ 0.83
THBS1P07996 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
THBS1P07996 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.26■□□□□ 0.83
THBS1P07996 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.26■□□□□ 0.83
THBS1P07996 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
THBS1P07996 AC080038.3-201ENST00000623346 1952 ntBASIC20.26■□□□□ 0.83
THBS1P07996 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
THBS1P07996 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
THBS1P07996 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
THBS1P07996 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
THBS1P07996 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
THBS1P07996 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
THBS1P07996 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
THBS1P07996 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms