Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HCN1O60741 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.51■□□□□ 0.87
HCN1O60741 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HCN1O60741 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.51■□□□□ 0.87
HCN1O60741 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HCN1O60741 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.51■□□□□ 0.87
HCN1O60741 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.51■□□□□ 0.87
HCN1O60741 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HCN1O60741 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HCN1O60741 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HCN1O60741 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
HCN1O60741 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HCN1O60741 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
HCN1O60741 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
HCN1O60741 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HCN1O60741 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HCN1O60741 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HCN1O60741 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
HCN1O60741 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HCN1O60741 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
HCN1O60741 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HCN1O60741 SYT6-210ENST00000641643 1587 ntBASIC20.5■□□□□ 0.87
HCN1O60741 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.5■□□□□ 0.87
HCN1O60741 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
HCN1O60741 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.49■□□□□ 0.87
HCN1O60741 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HCN1O60741 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
HCN1O60741 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HCN1O60741 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.49■□□□□ 0.87
HCN1O60741 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.49■□□□□ 0.87
HCN1O60741 AC241377.3-202ENST00000626088 1088 ntBASIC20.49■□□□□ 0.87
HCN1O60741 AC241585.3-202ENST00000628937 1088 ntBASIC20.49■□□□□ 0.87
HCN1O60741 AC245100.8-202ENST00000629247 1058 ntBASIC20.49■□□□□ 0.87
HCN1O60741 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
HCN1O60741 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
HCN1O60741 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
HCN1O60741 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HCN1O60741 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HCN1O60741 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HCN1O60741 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HCN1O60741 C17orf82-201ENST00000623772 1530 ntBASIC20.48■□□□□ 0.87
HCN1O60741 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HCN1O60741 EDA-201ENST00000338901 1233 ntBASIC20.48■□□□□ 0.87
HCN1O60741 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
HCN1O60741 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
HCN1O60741 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.48■□□□□ 0.87
HCN1O60741 AC024257.2-201ENST00000549699 147 ntBASIC20.48■□□□□ 0.87
HCN1O60741 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HCN1O60741 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.48■□□□□ 0.87
HCN1O60741 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HCN1O60741 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HCN1O60741 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
HCN1O60741 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.47■□□□□ 0.87
HCN1O60741 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
HCN1O60741 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HCN1O60741 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.47■□□□□ 0.87
HCN1O60741 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HCN1O60741 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HCN1O60741 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
HCN1O60741 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HCN1O60741 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HCN1O60741 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.46■□□□□ 0.87
HCN1O60741 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.46■□□□□ 0.87
HCN1O60741 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.46■□□□□ 0.87
HCN1O60741 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HCN1O60741 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.46■□□□□ 0.87
HCN1O60741 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
HCN1O60741 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.46■□□□□ 0.87
HCN1O60741 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.46■□□□□ 0.87
HCN1O60741 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HCN1O60741 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.46■□□□□ 0.87
HCN1O60741 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HCN1O60741 AC142381.2-201ENST00000566120 298 ntBASIC20.46■□□□□ 0.87
HCN1O60741 AL138724.1-201ENST00000606771 1088 ntBASIC20.46■□□□□ 0.87
HCN1O60741 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.46■□□□□ 0.87
HCN1O60741 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
HCN1O60741 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HCN1O60741 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HCN1O60741 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
HCN1O60741 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HCN1O60741 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HCN1O60741 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HCN1O60741 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
HCN1O60741 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HCN1O60741 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HCN1O60741 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
HCN1O60741 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.45■□□□□ 0.86
HCN1O60741 AC099791.2-201ENST00000605725 427 ntBASIC20.45■□□□□ 0.86
HCN1O60741 AL355001.2-201ENST00000620617 1191 ntBASIC20.45■□□□□ 0.86
HCN1O60741 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
HCN1O60741 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HCN1O60741 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HCN1O60741 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HCN1O60741 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.44■□□□□ 0.86
HCN1O60741 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.44■□□□□ 0.86
HCN1O60741 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HCN1O60741 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
HCN1O60741 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HCN1O60741 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HCN1O60741 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms