Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC26■■□□□ 1.75
CTNND1O60716 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC26■■□□□ 1.75
CTNND1O60716 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC26■■□□□ 1.75
CTNND1O60716 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC26■■□□□ 1.75
CTNND1O60716 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CTNND1O60716 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CTNND1O60716 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
CTNND1O60716 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CTNND1O60716 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
CTNND1O60716 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC25.99■■□□□ 1.75
CTNND1O60716 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC25.99■■□□□ 1.75
CTNND1O60716 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC25.99■■□□□ 1.75
CTNND1O60716 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC25.99■■□□□ 1.75
CTNND1O60716 TPRG1LP1-201ENST00000598702 760 ntBASIC25.99■■□□□ 1.75
CTNND1O60716 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC25.99■■□□□ 1.75
CTNND1O60716 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CTNND1O60716 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
CTNND1O60716 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
CTNND1O60716 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
CTNND1O60716 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC25.98■■□□□ 1.75
CTNND1O60716 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
CTNND1O60716 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CTNND1O60716 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
CTNND1O60716 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CTNND1O60716 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC25.98■■□□□ 1.75
CTNND1O60716 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CTNND1O60716 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
CTNND1O60716 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
CTNND1O60716 SHD-204ENST00000599689 1729 ntTSL 5 BASIC25.97■■□□□ 1.75
CTNND1O60716 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
CTNND1O60716 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
CTNND1O60716 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CTNND1O60716 ID1-201ENST00000376105 1233 ntBASIC25.97■■□□□ 1.75
CTNND1O60716 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
CTNND1O60716 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC25.97■■□□□ 1.75
CTNND1O60716 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC25.97■■□□□ 1.75
CTNND1O60716 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC25.97■■□□□ 1.75
CTNND1O60716 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC25.97■■□□□ 1.75
CTNND1O60716 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC25.97■■□□□ 1.75
CTNND1O60716 AC068587.7-201ENST00000641602 218 ntBASIC25.97■■□□□ 1.75
CTNND1O60716 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CTNND1O60716 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC25.97■■□□□ 1.75
CTNND1O60716 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CTNND1O60716 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC25.96■■□□□ 1.75
CTNND1O60716 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC25.96■■□□□ 1.75
CTNND1O60716 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC25.96■■□□□ 1.75
CTNND1O60716 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
CTNND1O60716 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CTNND1O60716 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CTNND1O60716 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CTNND1O60716 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
CTNND1O60716 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
CTNND1O60716 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC25.95■■□□□ 1.75
CTNND1O60716 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC25.95■■□□□ 1.74
CTNND1O60716 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.74
CTNND1O60716 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
CTNND1O60716 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC25.95■■□□□ 1.74
CTNND1O60716 KRT18P61-201ENST00000585825 1298 ntBASIC25.95■■□□□ 1.74
CTNND1O60716 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC25.95■■□□□ 1.74
CTNND1O60716 LINC00543-201ENST00000567234 1845 ntBASIC25.95■■□□□ 1.74
CTNND1O60716 AC079630.1-202ENST00000618127 1840 ntBASIC25.95■■□□□ 1.74
CTNND1O60716 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CTNND1O60716 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC25.94■■□□□ 1.74
CTNND1O60716 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
CTNND1O60716 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CTNND1O60716 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC25.94■■□□□ 1.74
CTNND1O60716 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CTNND1O60716 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CTNND1O60716 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC25.94■■□□□ 1.74
CTNND1O60716 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
CTNND1O60716 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
CTNND1O60716 AC020928.2-201ENST00000588717 2197 ntBASIC25.93■■□□□ 1.74
CTNND1O60716 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CTNND1O60716 AC004687.1-201ENST00000579003 1625 ntBASIC25.93■■□□□ 1.74
CTNND1O60716 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CTNND1O60716 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CTNND1O60716 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
CTNND1O60716 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
CTNND1O60716 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC25.93■■□□□ 1.74
CTNND1O60716 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
CTNND1O60716 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CTNND1O60716 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
CTNND1O60716 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC25.92■■□□□ 1.74
CTNND1O60716 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC25.92■■□□□ 1.74
CTNND1O60716 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC25.92■■□□□ 1.74
CTNND1O60716 AC006015.1-201ENST00000429970 570 ntBASIC25.92■■□□□ 1.74
CTNND1O60716 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC25.92■■□□□ 1.74
CTNND1O60716 GALNS-213ENST00000569433 723 ntTSL 3 BASIC25.92■■□□□ 1.74
CTNND1O60716 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
CTNND1O60716 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC25.92■■□□□ 1.74
CTNND1O60716 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
CTNND1O60716 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CTNND1O60716 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC25.92■■□□□ 1.74
CTNND1O60716 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
CTNND1O60716 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CTNND1O60716 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
CTNND1O60716 BX005040.4-201ENST00000637145 1518 ntBASIC25.91■■□□□ 1.74
CTNND1O60716 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC25.91■■□□□ 1.74
CTNND1O60716 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CTNND1O60716 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms