Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GMDSO60547 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.42■□□□□ 0.7
GMDSO60547 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GMDSO60547 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.42■□□□□ 0.7
GMDSO60547 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GMDSO60547 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GMDSO60547 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.42■□□□□ 0.7
GMDSO60547 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
GMDSO60547 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
GMDSO60547 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GMDSO60547 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.42■□□□□ 0.7
GMDSO60547 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
GMDSO60547 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.42■□□□□ 0.7
GMDSO60547 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GMDSO60547 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.42■□□□□ 0.7
GMDSO60547 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.42■□□□□ 0.7
GMDSO60547 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GMDSO60547 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GMDSO60547 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GMDSO60547 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
GMDSO60547 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GMDSO60547 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.41■□□□□ 0.7
GMDSO60547 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GMDSO60547 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GMDSO60547 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
GMDSO60547 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GMDSO60547 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GMDSO60547 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.41■□□□□ 0.7
GMDSO60547 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GMDSO60547 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GMDSO60547 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GMDSO60547 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GMDSO60547 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
GMDSO60547 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GMDSO60547 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
GMDSO60547 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
GMDSO60547 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.4■□□□□ 0.7
GMDSO60547 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.4■□□□□ 0.7
GMDSO60547 MTDHP2-201ENST00000601468 714 ntBASIC19.4■□□□□ 0.7
GMDSO60547 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
GMDSO60547 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.4■□□□□ 0.7
GMDSO60547 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
GMDSO60547 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GMDSO60547 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GMDSO60547 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GMDSO60547 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GMDSO60547 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GMDSO60547 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
GMDSO60547 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GMDSO60547 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.39■□□□□ 0.69
GMDSO60547 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
GMDSO60547 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
GMDSO60547 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.39■□□□□ 0.69
GMDSO60547 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
GMDSO60547 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GMDSO60547 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GMDSO60547 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
GMDSO60547 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
GMDSO60547 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
GMDSO60547 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
GMDSO60547 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GMDSO60547 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GMDSO60547 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.38■□□□□ 0.69
GMDSO60547 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GMDSO60547 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
GMDSO60547 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GMDSO60547 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.38■□□□□ 0.69
GMDSO60547 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.38■□□□□ 0.69
GMDSO60547 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.38■□□□□ 0.69
GMDSO60547 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
GMDSO60547 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.38■□□□□ 0.69
GMDSO60547 AC005703.6-201ENST00000623265 1329 ntBASIC19.38■□□□□ 0.69
GMDSO60547 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.38■□□□□ 0.69
GMDSO60547 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GMDSO60547 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.37■□□□□ 0.69
GMDSO60547 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.37■□□□□ 0.69
GMDSO60547 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GMDSO60547 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
GMDSO60547 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
GMDSO60547 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.37■□□□□ 0.69
GMDSO60547 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GMDSO60547 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GMDSO60547 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GMDSO60547 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
GMDSO60547 RNF165-205ENST00000588679 2904 ntBASIC19.37■□□□□ 0.69
GMDSO60547 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
GMDSO60547 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GMDSO60547 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
GMDSO60547 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GMDSO60547 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GMDSO60547 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GMDSO60547 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GMDSO60547 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
GMDSO60547 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GMDSO60547 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GMDSO60547 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
GMDSO60547 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.36■□□□□ 0.69
GMDSO60547 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GMDSO60547 AC010997.5-201ENST00000609182 354 ntBASIC19.36■□□□□ 0.69
GMDSO60547 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms