Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 STX4-202ENST00000394998 1498 ntTSL 2 BASIC27.36■■□□□ 1.97
GRIN3BO60391 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
GRIN3BO60391 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC27.35■■□□□ 1.97
GRIN3BO60391 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
GRIN3BO60391 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC27.35■■□□□ 1.97
GRIN3BO60391 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC27.35■■□□□ 1.97
GRIN3BO60391 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC27.35■■□□□ 1.97
GRIN3BO60391 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
GRIN3BO60391 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
GRIN3BO60391 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
GRIN3BO60391 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
GRIN3BO60391 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC27.34■■□□□ 1.97
GRIN3BO60391 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC27.34■■□□□ 1.97
GRIN3BO60391 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
GRIN3BO60391 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC27.34■■□□□ 1.97
GRIN3BO60391 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC27.34■■□□□ 1.97
GRIN3BO60391 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
GRIN3BO60391 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
GRIN3BO60391 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
GRIN3BO60391 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC27.34■■□□□ 1.97
GRIN3BO60391 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
GRIN3BO60391 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC27.34■■□□□ 1.97
GRIN3BO60391 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
GRIN3BO60391 SHF-208ENST00000560734 1731 ntTSL 3 BASIC27.33■■□□□ 1.97
GRIN3BO60391 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
GRIN3BO60391 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
GRIN3BO60391 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
GRIN3BO60391 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC27.33■■□□□ 1.97
GRIN3BO60391 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC27.33■■□□□ 1.97
GRIN3BO60391 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
GRIN3BO60391 AL158047.1-201ENST00000445918 881 ntBASIC27.33■■□□□ 1.97
GRIN3BO60391 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC27.33■■□□□ 1.97
GRIN3BO60391 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC27.33■■□□□ 1.97
GRIN3BO60391 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
GRIN3BO60391 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC27.33■■□□□ 1.97
GRIN3BO60391 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
GRIN3BO60391 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC27.32■■□□□ 1.96
GRIN3BO60391 PARP1-202ENST00000366792 553 ntTSL 3 BASIC27.32■■□□□ 1.96
GRIN3BO60391 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC27.32■■□□□ 1.96
GRIN3BO60391 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC27.32■■□□□ 1.96
GRIN3BO60391 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC27.32■■□□□ 1.96
GRIN3BO60391 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC27.32■■□□□ 1.96
GRIN3BO60391 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC27.32■■□□□ 1.96
GRIN3BO60391 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC27.32■■□□□ 1.96
GRIN3BO60391 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
GRIN3BO60391 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
GRIN3BO60391 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
GRIN3BO60391 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
GRIN3BO60391 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
GRIN3BO60391 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
GRIN3BO60391 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC27.31■■□□□ 1.96
GRIN3BO60391 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC27.31■■□□□ 1.96
GRIN3BO60391 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
GRIN3BO60391 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
GRIN3BO60391 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC27.31■■□□□ 1.96
GRIN3BO60391 AC142381.4-202ENST00000563973 229 ntBASIC27.31■■□□□ 1.96
GRIN3BO60391 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
GRIN3BO60391 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC27.31■■□□□ 1.96
GRIN3BO60391 CD37-213ENST00000598095 1598 ntTSL 2 BASIC27.31■■□□□ 1.96
GRIN3BO60391 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC27.31■■□□□ 1.96
GRIN3BO60391 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC27.31■■□□□ 1.96
GRIN3BO60391 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC27.3■■□□□ 1.96
GRIN3BO60391 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
GRIN3BO60391 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC27.3■■□□□ 1.96
GRIN3BO60391 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
GRIN3BO60391 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC27.3■■□□□ 1.96
GRIN3BO60391 FP325331.1-202ENST00000623531 1380 ntBASIC27.3■■□□□ 1.96
GRIN3BO60391 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
GRIN3BO60391 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
GRIN3BO60391 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
GRIN3BO60391 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
GRIN3BO60391 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC27.29■■□□□ 1.96
GRIN3BO60391 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC27.29■■□□□ 1.96
GRIN3BO60391 ERN1-208ENST00000606895 2068 ntBASIC27.28■■□□□ 1.96
GRIN3BO60391 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
GRIN3BO60391 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
GRIN3BO60391 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
GRIN3BO60391 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
GRIN3BO60391 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
GRIN3BO60391 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
GRIN3BO60391 FAM210CP-201ENST00000445714 574 ntBASIC27.28■■□□□ 1.96
GRIN3BO60391 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC27.28■■□□□ 1.96
GRIN3BO60391 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC27.28■■□□□ 1.96
GRIN3BO60391 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC27.28■■□□□ 1.96
GRIN3BO60391 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
GRIN3BO60391 ADM-205ENST00000528544 586 ntTSL 2 BASIC27.28■■□□□ 1.96
GRIN3BO60391 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
GRIN3BO60391 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
GRIN3BO60391 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC27.28■■□□□ 1.96
GRIN3BO60391 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
GRIN3BO60391 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC27.27■■□□□ 1.96
GRIN3BO60391 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC27.27■■□□□ 1.96
GRIN3BO60391 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
GRIN3BO60391 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
GRIN3BO60391 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC27.26■■□□□ 1.95
GRIN3BO60391 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
GRIN3BO60391 RARRES2P4-201ENST00000514074 484 ntBASIC27.26■■□□□ 1.95
GRIN3BO60391 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC27.26■■□□□ 1.95
GRIN3BO60391 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC27.26■■□□□ 1.95
GRIN3BO60391 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms