Protein–RNA interactions for Protein: O60343

TBC1D4, TBC1 domain family member 4, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4O60343 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
TBC1D4O60343 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
TBC1D4O60343 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
TBC1D4O60343 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC23.46■■□□□ 1.35
TBC1D4O60343 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.46■■□□□ 1.35
TBC1D4O60343 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
TBC1D4O60343 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.46■■□□□ 1.35
TBC1D4O60343 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC23.46■■□□□ 1.35
TBC1D4O60343 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.45■■□□□ 1.35
TBC1D4O60343 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
TBC1D4O60343 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.35
TBC1D4O60343 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
TBC1D4O60343 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
TBC1D4O60343 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC23.45■■□□□ 1.34
TBC1D4O60343 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
TBC1D4O60343 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC23.44■■□□□ 1.34
TBC1D4O60343 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
TBC1D4O60343 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
TBC1D4O60343 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC23.44■■□□□ 1.34
TBC1D4O60343 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC23.44■■□□□ 1.34
TBC1D4O60343 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.44■■□□□ 1.34
TBC1D4O60343 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
TBC1D4O60343 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
TBC1D4O60343 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
TBC1D4O60343 AC004687.1-201ENST00000579003 1625 ntBASIC23.44■■□□□ 1.34
TBC1D4O60343 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
TBC1D4O60343 KRT18P5-201ENST00000436075 1291 ntBASIC23.43■■□□□ 1.34
TBC1D4O60343 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23.43■■□□□ 1.34
TBC1D4O60343 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.43■■□□□ 1.34
TBC1D4O60343 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC23.43■■□□□ 1.34
TBC1D4O60343 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.43■■□□□ 1.34
TBC1D4O60343 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.43■■□□□ 1.34
TBC1D4O60343 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
TBC1D4O60343 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.43■■□□□ 1.34
TBC1D4O60343 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.43■■□□□ 1.34
TBC1D4O60343 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
TBC1D4O60343 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
TBC1D4O60343 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
TBC1D4O60343 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC23.42■■□□□ 1.34
TBC1D4O60343 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TBC1D4O60343 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
TBC1D4O60343 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
TBC1D4O60343 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC23.42■■□□□ 1.34
TBC1D4O60343 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
TBC1D4O60343 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC23.42■■□□□ 1.34
TBC1D4O60343 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TBC1D4O60343 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
TBC1D4O60343 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
TBC1D4O60343 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TBC1D4O60343 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TBC1D4O60343 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.41■■□□□ 1.34
TBC1D4O60343 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.41■■□□□ 1.34
TBC1D4O60343 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.41■■□□□ 1.34
TBC1D4O60343 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
TBC1D4O60343 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.41■■□□□ 1.34
TBC1D4O60343 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.41■■□□□ 1.34
TBC1D4O60343 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC23.41■■□□□ 1.34
TBC1D4O60343 CCDC92B-201ENST00000575506 885 ntBASIC23.41■■□□□ 1.34
TBC1D4O60343 TERF1P2-201ENST00000583350 1212 ntBASIC23.41■■□□□ 1.34
TBC1D4O60343 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
TBC1D4O60343 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.41■■□□□ 1.34
TBC1D4O60343 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
TBC1D4O60343 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
TBC1D4O60343 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TBC1D4O60343 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
TBC1D4O60343 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
TBC1D4O60343 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
TBC1D4O60343 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.4■■□□□ 1.34
TBC1D4O60343 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC23.4■■□□□ 1.34
TBC1D4O60343 AC105233.4-201ENST00000642045 216 ntBASIC23.4■■□□□ 1.34
TBC1D4O60343 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
TBC1D4O60343 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.34
TBC1D4O60343 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
TBC1D4O60343 MPST-204ENST00000404393 1329 ntTSL 5 BASIC23.39■■□□□ 1.34
TBC1D4O60343 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
TBC1D4O60343 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.39■■□□□ 1.34
TBC1D4O60343 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
TBC1D4O60343 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TBC1D4O60343 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
TBC1D4O60343 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC23.39■■□□□ 1.33
TBC1D4O60343 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
TBC1D4O60343 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
TBC1D4O60343 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TBC1D4O60343 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TBC1D4O60343 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TBC1D4O60343 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.38■■□□□ 1.33
TBC1D4O60343 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC23.38■■□□□ 1.33
TBC1D4O60343 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TBC1D4O60343 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TBC1D4O60343 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TBC1D4O60343 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TBC1D4O60343 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.38■■□□□ 1.33
TBC1D4O60343 AC022517.1-201ENST00000592429 346 ntBASIC23.38■■□□□ 1.33
TBC1D4O60343 AC068587.7-201ENST00000641602 218 ntBASIC23.38■■□□□ 1.33
TBC1D4O60343 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
TBC1D4O60343 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TBC1D4O60343 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TBC1D4O60343 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC23.37■■□□□ 1.33
TBC1D4O60343 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TBC1D4O60343 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC23.37■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms