Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
URB1O60287 GUSBP6-202ENST00000438529 1198 ntBASIC20.88■□□□□ 0.93
URB1O60287 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.88■□□□□ 0.93
URB1O60287 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.88■□□□□ 0.93
URB1O60287 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
URB1O60287 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
URB1O60287 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.88■□□□□ 0.93
URB1O60287 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
URB1O60287 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
URB1O60287 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
URB1O60287 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
URB1O60287 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
URB1O60287 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
URB1O60287 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
URB1O60287 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
URB1O60287 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
URB1O60287 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
URB1O60287 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
URB1O60287 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
URB1O60287 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
URB1O60287 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.87■□□□□ 0.93
URB1O60287 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
URB1O60287 AL138781.1-201ENST00000566567 1274 ntBASIC20.87■□□□□ 0.93
URB1O60287 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
URB1O60287 BX005040.4-201ENST00000637145 1518 ntBASIC20.87■□□□□ 0.93
URB1O60287 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
URB1O60287 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
URB1O60287 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
URB1O60287 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
URB1O60287 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
URB1O60287 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
URB1O60287 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
URB1O60287 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.87■□□□□ 0.93
URB1O60287 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.87■□□□□ 0.93
URB1O60287 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
URB1O60287 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
URB1O60287 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
URB1O60287 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
URB1O60287 SLC29A4P1-201ENST00000398760 971 ntBASIC20.86■□□□□ 0.93
URB1O60287 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.86■□□□□ 0.93
URB1O60287 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.86■□□□□ 0.93
URB1O60287 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
URB1O60287 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.85■□□□□ 0.93
URB1O60287 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
URB1O60287 SLC7A5P2-201ENST00000553010 536 ntBASIC20.85■□□□□ 0.93
URB1O60287 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.85■□□□□ 0.93
URB1O60287 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
URB1O60287 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
URB1O60287 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
URB1O60287 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.85■□□□□ 0.93
URB1O60287 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.85■□□□□ 0.93
URB1O60287 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
URB1O60287 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
URB1O60287 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
URB1O60287 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.85■□□□□ 0.93
URB1O60287 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
URB1O60287 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.85■□□□□ 0.93
URB1O60287 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
URB1O60287 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
URB1O60287 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
URB1O60287 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
URB1O60287 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.84■□□□□ 0.93
URB1O60287 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
URB1O60287 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
URB1O60287 AF201337.1-201ENST00000520239 748 ntBASIC20.84■□□□□ 0.93
URB1O60287 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.84■□□□□ 0.93
URB1O60287 TSPY6P-201ENST00000448518 926 ntBASIC20.84■□□□□ 0.93
URB1O60287 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.84■□□□□ 0.93
URB1O60287 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.84■□□□□ 0.93
URB1O60287 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.84■□□□□ 0.93
URB1O60287 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.84■□□□□ 0.93
URB1O60287 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
URB1O60287 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
URB1O60287 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
URB1O60287 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
URB1O60287 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
URB1O60287 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
URB1O60287 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.83■□□□□ 0.93
URB1O60287 DUX4L16-201ENST00000555130 1264 ntBASIC20.83■□□□□ 0.93
URB1O60287 AL121832.2-201ENST00000610979 668 ntBASIC20.83■□□□□ 0.93
URB1O60287 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.83■□□□□ 0.93
URB1O60287 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
URB1O60287 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
URB1O60287 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
URB1O60287 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.83■□□□□ 0.92
URB1O60287 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
URB1O60287 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
URB1O60287 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
URB1O60287 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
URB1O60287 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.82■□□□□ 0.92
URB1O60287 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
URB1O60287 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.82■□□□□ 0.92
URB1O60287 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.82■□□□□ 0.92
URB1O60287 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
URB1O60287 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
URB1O60287 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
URB1O60287 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.81■□□□□ 0.92
URB1O60287 ITM2C-210ENST00000620962 501 ntBASIC20.81■□□□□ 0.92
URB1O60287 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
URB1O60287 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms