Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SSSCA1O60232 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
SSSCA1O60232 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SSSCA1O60232 AC011551.1-201ENST00000614101 683 ntBASIC17.97■□□□□ 0.47
SSSCA1O60232 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SSSCA1O60232 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SSSCA1O60232 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SSSCA1O60232 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SSSCA1O60232 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
SSSCA1O60232 AC026310.3-201ENST00000625186 2373 ntBASIC17.96■□□□□ 0.47
SSSCA1O60232 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.96■□□□□ 0.47
SSSCA1O60232 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SSSCA1O60232 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SSSCA1O60232 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SSSCA1O60232 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SSSCA1O60232 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
SSSCA1O60232 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SSSCA1O60232 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
SSSCA1O60232 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
SSSCA1O60232 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SSSCA1O60232 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
SSSCA1O60232 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.95■□□□□ 0.46
SSSCA1O60232 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.95■□□□□ 0.46
SSSCA1O60232 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SSSCA1O60232 GPX1-201ENST00000419349 1106 ntBASIC17.95■□□□□ 0.46
SSSCA1O60232 SPCS2P3-201ENST00000500401 656 ntBASIC17.95■□□□□ 0.46
SSSCA1O60232 RPS2-202ENST00000526522 924 ntTSL 2 BASIC17.95■□□□□ 0.46
SSSCA1O60232 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SSSCA1O60232 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC17.95■□□□□ 0.46
SSSCA1O60232 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.95■□□□□ 0.46
SSSCA1O60232 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SSSCA1O60232 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SSSCA1O60232 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SSSCA1O60232 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
SSSCA1O60232 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SSSCA1O60232 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SSSCA1O60232 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
SSSCA1O60232 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SSSCA1O60232 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SSSCA1O60232 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SSSCA1O60232 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SSSCA1O60232 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SSSCA1O60232 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SSSCA1O60232 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC17.94■□□□□ 0.46
SSSCA1O60232 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.94■□□□□ 0.46
SSSCA1O60232 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SSSCA1O60232 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.94■□□□□ 0.46
SSSCA1O60232 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SSSCA1O60232 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SSSCA1O60232 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.94■□□□□ 0.46
SSSCA1O60232 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSSCA1O60232 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SSSCA1O60232 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSSCA1O60232 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.93■□□□□ 0.46
SSSCA1O60232 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSSCA1O60232 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.93■□□□□ 0.46
SSSCA1O60232 IDNK-203ENST00000405990 629 ntTSL 2 BASIC17.93■□□□□ 0.46
SSSCA1O60232 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SSSCA1O60232 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
SSSCA1O60232 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSSCA1O60232 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SSSCA1O60232 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSSCA1O60232 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.93■□□□□ 0.46
SSSCA1O60232 FAM99A-202ENST00000538190 1989 ntBASIC17.93■□□□□ 0.46
SSSCA1O60232 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SSSCA1O60232 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SSSCA1O60232 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.93■□□□□ 0.46
SSSCA1O60232 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.93■□□□□ 0.46
SSSCA1O60232 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSSCA1O60232 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SSSCA1O60232 AC087742.1-201ENST00000575880 1738 ntBASIC17.92■□□□□ 0.46
SSSCA1O60232 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SSSCA1O60232 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC17.92■□□□□ 0.46
SSSCA1O60232 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
SSSCA1O60232 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC17.92■□□□□ 0.46
SSSCA1O60232 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSSCA1O60232 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SSSCA1O60232 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SSSCA1O60232 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.92■□□□□ 0.46
SSSCA1O60232 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
SSSCA1O60232 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSSCA1O60232 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSSCA1O60232 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSSCA1O60232 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.91■□□□□ 0.46
SSSCA1O60232 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SSSCA1O60232 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SSSCA1O60232 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSSCA1O60232 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSSCA1O60232 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC17.91■□□□□ 0.46
SSSCA1O60232 MIR6765-201ENST00000614092 87 ntBASIC17.91■□□□□ 0.46
SSSCA1O60232 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSSCA1O60232 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.91■□□□□ 0.46
SSSCA1O60232 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SSSCA1O60232 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSSCA1O60232 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SSSCA1O60232 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSSCA1O60232 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SSSCA1O60232 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SSSCA1O60232 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.9■□□□□ 0.46
SSSCA1O60232 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms