Protein–RNA interactions for Protein: O15260

SURF4, Surfeit locus protein 4, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4O15260 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SURF4O15260 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SURF4O15260 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SURF4O15260 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SURF4O15260 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SURF4O15260 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SURF4O15260 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SURF4O15260 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.9■□□□□ 0.78
SURF4O15260 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
SURF4O15260 FBXW4P1-201ENST00000426721 2239 ntBASIC19.9■□□□□ 0.78
SURF4O15260 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SURF4O15260 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SURF4O15260 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.9■□□□□ 0.78
SURF4O15260 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.9■□□□□ 0.78
SURF4O15260 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.9■□□□□ 0.78
SURF4O15260 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SURF4O15260 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
SURF4O15260 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SURF4O15260 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SURF4O15260 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.89■□□□□ 0.77
SURF4O15260 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SURF4O15260 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SURF4O15260 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SURF4O15260 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.89■□□□□ 0.77
SURF4O15260 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SURF4O15260 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.89■□□□□ 0.77
SURF4O15260 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.89■□□□□ 0.77
SURF4O15260 AL137060.1-201ENST00000618151 2648 ntBASIC19.89■□□□□ 0.77
SURF4O15260 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SURF4O15260 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SURF4O15260 LINC01529-204ENST00000636474 1715 ntBASIC19.88■□□□□ 0.77
SURF4O15260 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SURF4O15260 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SURF4O15260 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SURF4O15260 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SURF4O15260 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.88■□□□□ 0.77
SURF4O15260 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.88■□□□□ 0.77
SURF4O15260 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SURF4O15260 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.88■□□□□ 0.77
SURF4O15260 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SURF4O15260 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SURF4O15260 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SURF4O15260 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SURF4O15260 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SURF4O15260 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SURF4O15260 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SURF4O15260 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SURF4O15260 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
SURF4O15260 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SURF4O15260 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.87■□□□□ 0.77
SURF4O15260 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SURF4O15260 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SURF4O15260 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SURF4O15260 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
SURF4O15260 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.87■□□□□ 0.77
SURF4O15260 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SURF4O15260 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SURF4O15260 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SURF4O15260 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SURF4O15260 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SURF4O15260 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SURF4O15260 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SURF4O15260 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.86■□□□□ 0.77
SURF4O15260 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.86■□□□□ 0.77
SURF4O15260 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SURF4O15260 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SURF4O15260 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.86■□□□□ 0.77
SURF4O15260 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SURF4O15260 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SURF4O15260 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SURF4O15260 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SURF4O15260 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SURF4O15260 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SURF4O15260 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.85■□□□□ 0.77
SURF4O15260 FP325331.1-202ENST00000623531 1380 ntBASIC19.85■□□□□ 0.77
SURF4O15260 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SURF4O15260 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.85■□□□□ 0.77
SURF4O15260 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SURF4O15260 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SURF4O15260 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SURF4O15260 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.85■□□□□ 0.77
SURF4O15260 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SURF4O15260 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
SURF4O15260 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.84■□□□□ 0.77
SURF4O15260 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
SURF4O15260 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SURF4O15260 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.84■□□□□ 0.77
SURF4O15260 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SURF4O15260 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SURF4O15260 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.84■□□□□ 0.77
SURF4O15260 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SURF4O15260 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SURF4O15260 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SURF4O15260 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
SURF4O15260 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SURF4O15260 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SURF4O15260 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SURF4O15260 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SURF4O15260 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
SURF4O15260 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms