Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.92■□□□□ 0.78
SMAD9O15198 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMAD9O15198 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMAD9O15198 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
SMAD9O15198 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMAD9O15198 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.91■□□□□ 0.78
SMAD9O15198 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SMAD9O15198 UNC93B3-201ENST00000308076 687 ntBASIC19.91■□□□□ 0.78
SMAD9O15198 SERBP1P1-201ENST00000396021 1160 ntBASIC19.91■□□□□ 0.78
SMAD9O15198 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.91■□□□□ 0.78
SMAD9O15198 MIR3181-201ENST00000578512 73 ntBASIC19.91■□□□□ 0.78
SMAD9O15198 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.91■□□□□ 0.78
SMAD9O15198 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMAD9O15198 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SMAD9O15198 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.91■□□□□ 0.78
SMAD9O15198 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.91■□□□□ 0.78
SMAD9O15198 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMAD9O15198 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMAD9O15198 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.9■□□□□ 0.78
SMAD9O15198 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
SMAD9O15198 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMAD9O15198 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMAD9O15198 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
SMAD9O15198 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMAD9O15198 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.9■□□□□ 0.78
SMAD9O15198 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMAD9O15198 pRNA.6-201ENST00000610482 90 ntBASIC19.9■□□□□ 0.78
SMAD9O15198 pRNA.5-201ENST00000612139 90 ntBASIC19.9■□□□□ 0.78
SMAD9O15198 AC110285.6-201ENST00000617652 491 ntBASIC19.9■□□□□ 0.78
SMAD9O15198 pRNA.11-201ENST00000618423 90 ntBASIC19.9■□□□□ 0.78
SMAD9O15198 pRNA.13-201ENST00000619112 90 ntBASIC19.9■□□□□ 0.78
SMAD9O15198 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.9■□□□□ 0.78
SMAD9O15198 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMAD9O15198 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SMAD9O15198 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMAD9O15198 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SMAD9O15198 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.9■□□□□ 0.78
SMAD9O15198 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
SMAD9O15198 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMAD9O15198 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMAD9O15198 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
SMAD9O15198 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.78
SMAD9O15198 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SMAD9O15198 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.89■□□□□ 0.77
SMAD9O15198 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.89■□□□□ 0.77
SMAD9O15198 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SMAD9O15198 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
SMAD9O15198 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SMAD9O15198 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SMAD9O15198 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.89■□□□□ 0.77
SMAD9O15198 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
SMAD9O15198 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMAD9O15198 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
SMAD9O15198 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMAD9O15198 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.88■□□□□ 0.77
SMAD9O15198 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.88■□□□□ 0.77
SMAD9O15198 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMAD9O15198 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMAD9O15198 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.88■□□□□ 0.77
SMAD9O15198 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMAD9O15198 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMAD9O15198 AL499627.2-201ENST00000606283 725 ntBASIC19.88■□□□□ 0.77
SMAD9O15198 AL136162.1-201ENST00000607711 1078 ntBASIC19.88■□□□□ 0.77
SMAD9O15198 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.88■□□□□ 0.77
SMAD9O15198 DUSP8P3-201ENST00000399571 1760 ntBASIC19.88■□□□□ 0.77
SMAD9O15198 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMAD9O15198 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.87■□□□□ 0.77
SMAD9O15198 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.87■□□□□ 0.77
SMAD9O15198 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.87■□□□□ 0.77
SMAD9O15198 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.87■□□□□ 0.77
SMAD9O15198 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.87■□□□□ 0.77
SMAD9O15198 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.87■□□□□ 0.77
SMAD9O15198 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.87■□□□□ 0.77
SMAD9O15198 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMAD9O15198 C9orf163-202ENST00000624034 2573 ntBASIC19.87■□□□□ 0.77
SMAD9O15198 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMAD9O15198 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMAD9O15198 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMAD9O15198 AL138724.1-201ENST00000606771 1088 ntBASIC19.87■□□□□ 0.77
SMAD9O15198 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.87■□□□□ 0.77
SMAD9O15198 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SMAD9O15198 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMAD9O15198 CLDN5-201ENST00000403084 2357 ntBASIC19.87■□□□□ 0.77
SMAD9O15198 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.87■□□□□ 0.77
SMAD9O15198 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMAD9O15198 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMAD9O15198 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMAD9O15198 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMAD9O15198 AC079834.2-201ENST00000609776 1949 ntBASIC19.86■□□□□ 0.77
SMAD9O15198 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMAD9O15198 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMAD9O15198 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMAD9O15198 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.86■□□□□ 0.77
SMAD9O15198 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMAD9O15198 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.86■□□□□ 0.77
SMAD9O15198 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SMAD9O15198 AL139246.5-201ENST00000606645 996 ntBASIC19.86■□□□□ 0.77
SMAD9O15198 AC011298.3-201ENST00000615796 283 ntBASIC19.86■□□□□ 0.77
SMAD9O15198 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMAD9O15198 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms