Protein–RNA interactions for Protein: O15016

TRIM66, Tripartite motif-containing protein 66, humanhuman

Predictions only

Length 1,216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM66O15016 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.77■■□□□ 1.4
TRIM66O15016 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.39
TRIM66O15016 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM66O15016 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM66O15016 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM66O15016 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM66O15016 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM66O15016 SERBP1P1-201ENST00000396021 1160 ntBASIC23.76■■□□□ 1.39
TRIM66O15016 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.76■■□□□ 1.39
TRIM66O15016 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.76■■□□□ 1.39
TRIM66O15016 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.76■■□□□ 1.39
TRIM66O15016 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.76■■□□□ 1.39
TRIM66O15016 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM66O15016 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM66O15016 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM66O15016 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
TRIM66O15016 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
TRIM66O15016 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TRIM66O15016 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC23.75■■□□□ 1.39
TRIM66O15016 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
TRIM66O15016 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.75■■□□□ 1.39
TRIM66O15016 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.75■■□□□ 1.39
TRIM66O15016 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.75■■□□□ 1.39
TRIM66O15016 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRIM66O15016 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
TRIM66O15016 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
TRIM66O15016 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TRIM66O15016 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRIM66O15016 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRIM66O15016 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRIM66O15016 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.75■■□□□ 1.39
TRIM66O15016 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM66O15016 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM66O15016 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM66O15016 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM66O15016 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.74■■□□□ 1.39
TRIM66O15016 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
TRIM66O15016 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM66O15016 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
TRIM66O15016 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
TRIM66O15016 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM66O15016 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM66O15016 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM66O15016 AC004812.2-201ENST00000611079 2094 ntBASIC23.73■■□□□ 1.39
TRIM66O15016 EDA-201ENST00000338901 1233 ntBASIC23.73■■□□□ 1.39
TRIM66O15016 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM66O15016 AC011298.3-201ENST00000615796 283 ntBASIC23.73■■□□□ 1.39
TRIM66O15016 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM66O15016 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
TRIM66O15016 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.73■■□□□ 1.39
TRIM66O15016 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM66O15016 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM66O15016 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.72■■□□□ 1.39
TRIM66O15016 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TRIM66O15016 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TRIM66O15016 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TRIM66O15016 AC006455.2-201ENST00000429931 906 ntBASIC23.72■■□□□ 1.39
TRIM66O15016 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.72■■□□□ 1.39
TRIM66O15016 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TRIM66O15016 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TRIM66O15016 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TRIM66O15016 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.72■■□□□ 1.39
TRIM66O15016 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TRIM66O15016 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TRIM66O15016 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.72■■□□□ 1.39
TRIM66O15016 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC23.72■■□□□ 1.39
TRIM66O15016 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRIM66O15016 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TRIM66O15016 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.71■■□□□ 1.39
TRIM66O15016 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.71■■□□□ 1.39
TRIM66O15016 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.71■■□□□ 1.39
TRIM66O15016 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.71■■□□□ 1.39
TRIM66O15016 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRIM66O15016 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TRIM66O15016 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRIM66O15016 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.71■■□□□ 1.39
TRIM66O15016 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TRIM66O15016 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
TRIM66O15016 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.39
TRIM66O15016 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
TRIM66O15016 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.39
TRIM66O15016 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TRIM66O15016 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRIM66O15016 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRIM66O15016 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
TRIM66O15016 AL355001.2-201ENST00000620617 1191 ntBASIC23.7■■□□□ 1.38
TRIM66O15016 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRIM66O15016 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRIM66O15016 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRIM66O15016 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRIM66O15016 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRIM66O15016 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRIM66O15016 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TRIM66O15016 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRIM66O15016 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.69■■□□□ 1.38
TRIM66O15016 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRIM66O15016 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRIM66O15016 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TRIM66O15016 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.69■■□□□ 1.38
TRIM66O15016 AC142381.2-201ENST00000566120 298 ntBASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms