Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
ATP2A1O14983 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
ATP2A1O14983 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
ATP2A1O14983 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
ATP2A1O14983 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
ATP2A1O14983 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC25.41■■□□□ 1.66
ATP2A1O14983 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
ATP2A1O14983 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
ATP2A1O14983 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC25.41■■□□□ 1.66
ATP2A1O14983 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC25.41■■□□□ 1.66
ATP2A1O14983 AC068587.7-201ENST00000641602 218 ntBASIC25.41■■□□□ 1.66
ATP2A1O14983 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
ATP2A1O14983 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC25.41■■□□□ 1.66
ATP2A1O14983 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
ATP2A1O14983 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
ATP2A1O14983 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
ATP2A1O14983 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
ATP2A1O14983 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ATP2A1O14983 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ATP2A1O14983 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC25.4■■□□□ 1.66
ATP2A1O14983 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC25.4■■□□□ 1.66
ATP2A1O14983 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC25.4■■□□□ 1.66
ATP2A1O14983 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC25.4■■□□□ 1.66
ATP2A1O14983 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
ATP2A1O14983 KRT18P14-201ENST00000534205 1250 ntBASIC25.4■■□□□ 1.66
ATP2A1O14983 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
ATP2A1O14983 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
ATP2A1O14983 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC25.4■■□□□ 1.66
ATP2A1O14983 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
ATP2A1O14983 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC25.39■■□□□ 1.66
ATP2A1O14983 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
ATP2A1O14983 NT5C3AP1-201ENST00000394500 1012 ntBASIC25.39■■□□□ 1.66
ATP2A1O14983 IKBKGP1-201ENST00000612193 1073 ntBASIC25.39■■□□□ 1.66
ATP2A1O14983 AC092437.1-201ENST00000624794 1048 ntBASIC25.39■■□□□ 1.66
ATP2A1O14983 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.65
ATP2A1O14983 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
ATP2A1O14983 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
ATP2A1O14983 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
ATP2A1O14983 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
ATP2A1O14983 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
ATP2A1O14983 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
ATP2A1O14983 AL353803.4-201ENST00000565882 1934 ntBASIC25.38■■□□□ 1.65
ATP2A1O14983 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
ATP2A1O14983 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
ATP2A1O14983 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
ATP2A1O14983 MFF-208ENST00000409616 1247 ntTSL 5 BASIC25.38■■□□□ 1.65
ATP2A1O14983 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC25.38■■□□□ 1.65
ATP2A1O14983 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
ATP2A1O14983 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
ATP2A1O14983 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
ATP2A1O14983 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC25.38■■□□□ 1.65
ATP2A1O14983 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC25.38■■□□□ 1.65
ATP2A1O14983 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
ATP2A1O14983 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
ATP2A1O14983 AC004687.1-201ENST00000579003 1625 ntBASIC25.37■■□□□ 1.65
ATP2A1O14983 RARA-203ENST00000394086 2008 ntTSL 2 BASIC25.37■■□□□ 1.65
ATP2A1O14983 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
ATP2A1O14983 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
ATP2A1O14983 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
ATP2A1O14983 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC25.37■■□□□ 1.65
ATP2A1O14983 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
ATP2A1O14983 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC25.37■■□□□ 1.65
ATP2A1O14983 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC25.37■■□□□ 1.65
ATP2A1O14983 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
ATP2A1O14983 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC25.37■■□□□ 1.65
ATP2A1O14983 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC25.37■■□□□ 1.65
ATP2A1O14983 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
ATP2A1O14983 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
ATP2A1O14983 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC25.36■■□□□ 1.65
ATP2A1O14983 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC25.36■■□□□ 1.65
ATP2A1O14983 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
ATP2A1O14983 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
ATP2A1O14983 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
ATP2A1O14983 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
ATP2A1O14983 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC25.35■■□□□ 1.65
ATP2A1O14983 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC25.35■■□□□ 1.65
ATP2A1O14983 NTF6G-201ENST00000591094 616 ntBASIC25.35■■□□□ 1.65
ATP2A1O14983 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
ATP2A1O14983 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC25.35■■□□□ 1.65
ATP2A1O14983 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
ATP2A1O14983 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC25.35■■□□□ 1.65
ATP2A1O14983 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC25.35■■□□□ 1.65
ATP2A1O14983 H19-210ENST00000439725 1929 ntTSL 2 BASIC25.35■■□□□ 1.65
ATP2A1O14983 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
ATP2A1O14983 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
ATP2A1O14983 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC25.34■■□□□ 1.65
ATP2A1O14983 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC25.34■■□□□ 1.65
ATP2A1O14983 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC25.34■■□□□ 1.65
ATP2A1O14983 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC25.34■■□□□ 1.65
ATP2A1O14983 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC25.34■■□□□ 1.65
ATP2A1O14983 AL137784.2-201ENST00000607332 1000 ntBASIC25.34■■□□□ 1.65
ATP2A1O14983 RARRES2P11-201ENST00000635158 484 ntBASIC25.34■■□□□ 1.65
ATP2A1O14983 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
ATP2A1O14983 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
ATP2A1O14983 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
ATP2A1O14983 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC25.33■■□□□ 1.65
ATP2A1O14983 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
ATP2A1O14983 TPRG1LP1-201ENST00000598702 760 ntBASIC25.33■■□□□ 1.65
ATP2A1O14983 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
ATP2A1O14983 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms