Protein–RNA interactions for Protein: A6NCQ9

RNF222, RING finger protein 222, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF222A6NCQ9 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF222A6NCQ9 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.98■□□□□ 0.47
RNF222A6NCQ9 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF222A6NCQ9 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF222A6NCQ9 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF222A6NCQ9 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF222A6NCQ9 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF222A6NCQ9 KRT18P10-201ENST00000388836 1287 ntBASIC17.98■□□□□ 0.47
RNF222A6NCQ9 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF222A6NCQ9 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RNF222A6NCQ9 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF222A6NCQ9 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF222A6NCQ9 AL353803.4-201ENST00000565882 1934 ntBASIC17.98■□□□□ 0.47
RNF222A6NCQ9 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC17.98■□□□□ 0.47
RNF222A6NCQ9 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
RNF222A6NCQ9 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
RNF222A6NCQ9 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
RNF222A6NCQ9 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
RNF222A6NCQ9 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF222A6NCQ9 AL162393.1-201ENST00000437852 946 ntBASIC17.97■□□□□ 0.47
RNF222A6NCQ9 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF222A6NCQ9 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
RNF222A6NCQ9 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF222A6NCQ9 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.97■□□□□ 0.47
RNF222A6NCQ9 AF106564.1-201ENST00000607058 2553 ntBASIC17.97■□□□□ 0.47
RNF222A6NCQ9 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF222A6NCQ9 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF222A6NCQ9 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
RNF222A6NCQ9 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF222A6NCQ9 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
RNF222A6NCQ9 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF222A6NCQ9 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.96■□□□□ 0.47
RNF222A6NCQ9 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
RNF222A6NCQ9 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC17.96■□□□□ 0.47
RNF222A6NCQ9 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
RNF222A6NCQ9 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF222A6NCQ9 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
RNF222A6NCQ9 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF222A6NCQ9 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RNF222A6NCQ9 SMPD5-203ENST00000639008 1464 ntBASIC17.95■□□□□ 0.46
RNF222A6NCQ9 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF222A6NCQ9 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
RNF222A6NCQ9 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF222A6NCQ9 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC17.95■□□□□ 0.46
RNF222A6NCQ9 DUX4L11-201ENST00000611504 1267 ntBASIC17.95■□□□□ 0.46
RNF222A6NCQ9 DUX4L12-201ENST00000614593 1267 ntBASIC17.95■□□□□ 0.46
RNF222A6NCQ9 DUX4L14-201ENST00000621227 1267 ntBASIC17.95■□□□□ 0.46
RNF222A6NCQ9 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF222A6NCQ9 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF222A6NCQ9 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF222A6NCQ9 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF222A6NCQ9 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.95■□□□□ 0.46
RNF222A6NCQ9 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF222A6NCQ9 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF222A6NCQ9 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF222A6NCQ9 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF222A6NCQ9 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF222A6NCQ9 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF222A6NCQ9 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF222A6NCQ9 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF222A6NCQ9 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC17.94■□□□□ 0.46
RNF222A6NCQ9 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF222A6NCQ9 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF222A6NCQ9 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF222A6NCQ9 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF222A6NCQ9 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.94■□□□□ 0.46
RNF222A6NCQ9 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF222A6NCQ9 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF222A6NCQ9 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF222A6NCQ9 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF222A6NCQ9 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF222A6NCQ9 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF222A6NCQ9 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF222A6NCQ9 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC17.93■□□□□ 0.46
RNF222A6NCQ9 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF222A6NCQ9 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF222A6NCQ9 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF222A6NCQ9 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF222A6NCQ9 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.93■□□□□ 0.46
RNF222A6NCQ9 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC17.93■□□□□ 0.46
RNF222A6NCQ9 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF222A6NCQ9 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF222A6NCQ9 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF222A6NCQ9 FEM1AP4-201ENST00000443167 1987 ntBASIC17.92■□□□□ 0.46
RNF222A6NCQ9 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF222A6NCQ9 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF222A6NCQ9 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC17.92■□□□□ 0.46
RNF222A6NCQ9 HGH1-207ENST00000628266 258 ntTSL 5 BASIC17.92■□□□□ 0.46
RNF222A6NCQ9 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF222A6NCQ9 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF222A6NCQ9 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF222A6NCQ9 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC17.92■□□□□ 0.46
RNF222A6NCQ9 LINC01006-201ENST00000333319 2292 ntBASIC17.92■□□□□ 0.46
RNF222A6NCQ9 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNF222A6NCQ9 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF222A6NCQ9 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF222A6NCQ9 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
RNF222A6NCQ9 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.91■□□□□ 0.46
RNF222A6NCQ9 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF222A6NCQ9 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms