Protein–RNA interactions for Protein: A6NCK2

TRIM43B, Tripartite motif-containing protein 43B, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43BA6NCK2 KRT18P11-201ENST00000435214 1283 ntBASIC24.37■■□□□ 1.49
TRIM43BA6NCK2 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC24.37■■□□□ 1.49
TRIM43BA6NCK2 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC24.37■■□□□ 1.49
TRIM43BA6NCK2 KRT18P6-201ENST00000555540 1265 ntBASIC24.37■■□□□ 1.49
TRIM43BA6NCK2 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC24.37■■□□□ 1.49
TRIM43BA6NCK2 AL050303.2-201ENST00000619798 666 ntBASIC24.37■■□□□ 1.49
TRIM43BA6NCK2 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TRIM43BA6NCK2 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TRIM43BA6NCK2 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TRIM43BA6NCK2 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC24.36■■□□□ 1.49
TRIM43BA6NCK2 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
TRIM43BA6NCK2 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
TRIM43BA6NCK2 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
TRIM43BA6NCK2 TESC-206ENST00000541210 936 ntTSL 3 BASIC24.36■■□□□ 1.49
TRIM43BA6NCK2 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
TRIM43BA6NCK2 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC24.36■■□□□ 1.49
TRIM43BA6NCK2 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC24.35■■□□□ 1.49
TRIM43BA6NCK2 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TRIM43BA6NCK2 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
TRIM43BA6NCK2 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
TRIM43BA6NCK2 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC24.35■■□□□ 1.49
TRIM43BA6NCK2 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TRIM43BA6NCK2 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
TRIM43BA6NCK2 TMEM202-AS1-202ENST00000565181 2325 ntBASIC24.35■■□□□ 1.49
TRIM43BA6NCK2 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TRIM43BA6NCK2 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TRIM43BA6NCK2 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
TRIM43BA6NCK2 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TRIM43BA6NCK2 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC24.34■■□□□ 1.49
TRIM43BA6NCK2 KLF13-207ENST00000560473 489 ntTSL 3 BASIC24.34■■□□□ 1.49
TRIM43BA6NCK2 AL121832.2-201ENST00000610979 668 ntBASIC24.34■■□□□ 1.49
TRIM43BA6NCK2 LINC01529-204ENST00000636474 1715 ntBASIC24.34■■□□□ 1.49
TRIM43BA6NCK2 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TRIM43BA6NCK2 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TRIM43BA6NCK2 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TRIM43BA6NCK2 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC24.34■■□□□ 1.49
TRIM43BA6NCK2 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
TRIM43BA6NCK2 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TRIM43BA6NCK2 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
TRIM43BA6NCK2 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
TRIM43BA6NCK2 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
TRIM43BA6NCK2 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
TRIM43BA6NCK2 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
TRIM43BA6NCK2 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC24.33■■□□□ 1.49
TRIM43BA6NCK2 TSPY6P-201ENST00000448518 926 ntBASIC24.33■■□□□ 1.49
TRIM43BA6NCK2 AC083906.2-201ENST00000511578 360 ntBASIC24.33■■□□□ 1.49
TRIM43BA6NCK2 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC24.33■■□□□ 1.49
TRIM43BA6NCK2 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC24.33■■□□□ 1.49
TRIM43BA6NCK2 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC24.33■■□□□ 1.49
TRIM43BA6NCK2 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.48
TRIM43BA6NCK2 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TRIM43BA6NCK2 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
TRIM43BA6NCK2 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC24.32■■□□□ 1.48
TRIM43BA6NCK2 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC24.32■■□□□ 1.48
TRIM43BA6NCK2 MIR4651-201ENST00000582622 73 ntBASIC24.32■■□□□ 1.48
TRIM43BA6NCK2 MFSD11-216ENST00000590393 1141 ntBASIC24.32■■□□□ 1.48
TRIM43BA6NCK2 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC24.32■■□□□ 1.48
TRIM43BA6NCK2 PARP1-210ENST00000629232 477 ntTSL 5 BASIC24.32■■□□□ 1.48
TRIM43BA6NCK2 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
TRIM43BA6NCK2 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
TRIM43BA6NCK2 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
TRIM43BA6NCK2 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TRIM43BA6NCK2 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TRIM43BA6NCK2 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TRIM43BA6NCK2 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
TRIM43BA6NCK2 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
TRIM43BA6NCK2 GUSBP6-202ENST00000438529 1198 ntBASIC24.31■■□□□ 1.48
TRIM43BA6NCK2 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC24.31■■□□□ 1.48
TRIM43BA6NCK2 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC24.31■■□□□ 1.48
TRIM43BA6NCK2 MAZ-216ENST00000616501 991 ntTSL 5 BASIC24.31■■□□□ 1.48
TRIM43BA6NCK2 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC24.31■■□□□ 1.48
TRIM43BA6NCK2 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
TRIM43BA6NCK2 AC144652.1-201ENST00000609974 1624 ntBASIC24.31■■□□□ 1.48
TRIM43BA6NCK2 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC24.31■■□□□ 1.48
TRIM43BA6NCK2 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TRIM43BA6NCK2 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC24.3■■□□□ 1.48
TRIM43BA6NCK2 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
TRIM43BA6NCK2 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC24.3■■□□□ 1.48
TRIM43BA6NCK2 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TRIM43BA6NCK2 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC24.3■■□□□ 1.48
TRIM43BA6NCK2 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC24.3■■□□□ 1.48
TRIM43BA6NCK2 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
TRIM43BA6NCK2 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
TRIM43BA6NCK2 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
TRIM43BA6NCK2 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TRIM43BA6NCK2 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC24.29■■□□□ 1.48
TRIM43BA6NCK2 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC24.29■■□□□ 1.48
TRIM43BA6NCK2 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
TRIM43BA6NCK2 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
TRIM43BA6NCK2 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TRIM43BA6NCK2 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
TRIM43BA6NCK2 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC24.29■■□□□ 1.48
TRIM43BA6NCK2 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC24.29■■□□□ 1.48
TRIM43BA6NCK2 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
TRIM43BA6NCK2 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
TRIM43BA6NCK2 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC24.29■■□□□ 1.48
TRIM43BA6NCK2 AL138781.1-201ENST00000566567 1274 ntBASIC24.29■■□□□ 1.48
TRIM43BA6NCK2 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC24.29■■□□□ 1.48
TRIM43BA6NCK2 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
TRIM43BA6NCK2 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms