Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CCDC163A0A0D9SF12 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCDC163A0A0D9SF12 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCDC163A0A0D9SF12 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CCDC163A0A0D9SF12 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CCDC163A0A0D9SF12 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
CCDC163A0A0D9SF12 GPX1P1-201ENST00000388829 606 ntBASIC22.09■■□□□ 1.13
CCDC163A0A0D9SF12 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CCDC163A0A0D9SF12 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC22.09■■□□□ 1.13
CCDC163A0A0D9SF12 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC22.09■■□□□ 1.13
CCDC163A0A0D9SF12 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC22.09■■□□□ 1.13
CCDC163A0A0D9SF12 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.09■■□□□ 1.13
CCDC163A0A0D9SF12 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCDC163A0A0D9SF12 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCDC163A0A0D9SF12 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCDC163A0A0D9SF12 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.09■■□□□ 1.13
CCDC163A0A0D9SF12 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CCDC163A0A0D9SF12 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CCDC163A0A0D9SF12 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.08■■□□□ 1.13
CCDC163A0A0D9SF12 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC22.08■■□□□ 1.13
CCDC163A0A0D9SF12 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.08■■□□□ 1.13
CCDC163A0A0D9SF12 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.08■■□□□ 1.13
CCDC163A0A0D9SF12 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CCDC163A0A0D9SF12 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
CCDC163A0A0D9SF12 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CCDC163A0A0D9SF12 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CCDC163A0A0D9SF12 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
CCDC163A0A0D9SF12 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CCDC163A0A0D9SF12 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CCDC163A0A0D9SF12 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCDC163A0A0D9SF12 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCDC163A0A0D9SF12 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CCDC163A0A0D9SF12 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCDC163A0A0D9SF12 AC087239.1-201ENST00000622671 572 ntBASIC22.06■■□□□ 1.12
CCDC163A0A0D9SF12 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.06■■□□□ 1.12
CCDC163A0A0D9SF12 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCDC163A0A0D9SF12 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
CCDC163A0A0D9SF12 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCDC163A0A0D9SF12 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.05■■□□□ 1.12
CCDC163A0A0D9SF12 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCDC163A0A0D9SF12 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCDC163A0A0D9SF12 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC22.05■■□□□ 1.12
CCDC163A0A0D9SF12 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC22.05■■□□□ 1.12
CCDC163A0A0D9SF12 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCDC163A0A0D9SF12 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CCDC163A0A0D9SF12 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CCDC163A0A0D9SF12 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CCDC163A0A0D9SF12 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC22.05■■□□□ 1.12
CCDC163A0A0D9SF12 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.05■■□□□ 1.12
CCDC163A0A0D9SF12 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CCDC163A0A0D9SF12 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCDC163A0A0D9SF12 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC22.04■■□□□ 1.12
CCDC163A0A0D9SF12 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCDC163A0A0D9SF12 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
CCDC163A0A0D9SF12 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CCDC163A0A0D9SF12 SPI1-203ENST00000533030 661 ntTSL 2 BASIC22.04■■□□□ 1.12
CCDC163A0A0D9SF12 AC142086.2-201ENST00000569753 217 ntBASIC22.04■■□□□ 1.12
CCDC163A0A0D9SF12 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCDC163A0A0D9SF12 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
CCDC163A0A0D9SF12 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CCDC163A0A0D9SF12 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC22.04■■□□□ 1.12
CCDC163A0A0D9SF12 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
CCDC163A0A0D9SF12 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCDC163A0A0D9SF12 MIR663A-201ENST00000385250 93 ntBASIC22.03■■□□□ 1.12
CCDC163A0A0D9SF12 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC22.03■■□□□ 1.12
CCDC163A0A0D9SF12 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC22.03■■□□□ 1.12
CCDC163A0A0D9SF12 SMUG1P1-201ENST00000590640 811 ntBASIC22.03■■□□□ 1.12
CCDC163A0A0D9SF12 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CCDC163A0A0D9SF12 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
CCDC163A0A0D9SF12 ESRRAP2-201ENST00000418437 1549 ntBASIC22.02■■□□□ 1.12
CCDC163A0A0D9SF12 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC22.02■■□□□ 1.12
CCDC163A0A0D9SF12 AC010141.3-201ENST00000456659 717 ntBASIC22.02■■□□□ 1.12
CCDC163A0A0D9SF12 CD99P1-205ENST00000527459 561 ntBASIC22.02■■□□□ 1.12
CCDC163A0A0D9SF12 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC22.02■■□□□ 1.12
CCDC163A0A0D9SF12 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
CCDC163A0A0D9SF12 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CCDC163A0A0D9SF12 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CCDC163A0A0D9SF12 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.02■■□□□ 1.11
CCDC163A0A0D9SF12 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.02■■□□□ 1.11
CCDC163A0A0D9SF12 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
CCDC163A0A0D9SF12 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
CCDC163A0A0D9SF12 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
CCDC163A0A0D9SF12 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
CCDC163A0A0D9SF12 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC22.01■■□□□ 1.11
CCDC163A0A0D9SF12 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CCDC163A0A0D9SF12 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC22.01■■□□□ 1.11
CCDC163A0A0D9SF12 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
CCDC163A0A0D9SF12 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC22.01■■□□□ 1.11
CCDC163A0A0D9SF12 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC22.01■■□□□ 1.11
CCDC163A0A0D9SF12 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
CCDC163A0A0D9SF12 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CCDC163A0A0D9SF12 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22■■□□□ 1.11
CCDC163A0A0D9SF12 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
CCDC163A0A0D9SF12 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC22■■□□□ 1.11
CCDC163A0A0D9SF12 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22■■□□□ 1.11
CCDC163A0A0D9SF12 AC079140.4-201ENST00000507448 529 ntBASIC22■■□□□ 1.11
CCDC163A0A0D9SF12 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CCDC163A0A0D9SF12 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC22■■□□□ 1.11
CCDC163A0A0D9SF12 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22■■□□□ 1.11
CCDC163A0A0D9SF12 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms