Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TRBV7-1A0A0A6YYK4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC17.13■□□□□ 0.33
TRBV7-1A0A0A6YYK4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV7-1A0A0A6YYK4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV7-1A0A0A6YYK4 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV7-1A0A0A6YYK4 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV7-1A0A0A6YYK4 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV7-1A0A0A6YYK4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
TRBV7-1A0A0A6YYK4 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV7-1A0A0A6YYK4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.12■□□□□ 0.33
TRBV7-1A0A0A6YYK4 pRNA.6-201ENST00000610482 90 ntBASIC17.12■□□□□ 0.33
TRBV7-1A0A0A6YYK4 pRNA.5-201ENST00000612139 90 ntBASIC17.12■□□□□ 0.33
TRBV7-1A0A0A6YYK4 pRNA.11-201ENST00000618423 90 ntBASIC17.12■□□□□ 0.33
TRBV7-1A0A0A6YYK4 pRNA.13-201ENST00000619112 90 ntBASIC17.12■□□□□ 0.33
TRBV7-1A0A0A6YYK4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TRBV7-1A0A0A6YYK4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TRBV7-1A0A0A6YYK4 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.12■□□□□ 0.33
TRBV7-1A0A0A6YYK4 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.12■□□□□ 0.33
TRBV7-1A0A0A6YYK4 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV7-1A0A0A6YYK4 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.12■□□□□ 0.33
TRBV7-1A0A0A6YYK4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TRBV7-1A0A0A6YYK4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV7-1A0A0A6YYK4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.11■□□□□ 0.33
TRBV7-1A0A0A6YYK4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRBV7-1A0A0A6YYK4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRBV7-1A0A0A6YYK4 AC233723.2-201ENST00000623798 2106 ntBASIC17.11■□□□□ 0.33
TRBV7-1A0A0A6YYK4 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV7-1A0A0A6YYK4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV7-1A0A0A6YYK4 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV7-1A0A0A6YYK4 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV7-1A0A0A6YYK4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV7-1A0A0A6YYK4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.11■□□□□ 0.33
TRBV7-1A0A0A6YYK4 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.11■□□□□ 0.33
TRBV7-1A0A0A6YYK4 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC17.11■□□□□ 0.33
TRBV7-1A0A0A6YYK4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV7-1A0A0A6YYK4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV7-1A0A0A6YYK4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.11■□□□□ 0.33
TRBV7-1A0A0A6YYK4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV7-1A0A0A6YYK4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV7-1A0A0A6YYK4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRBV7-1A0A0A6YYK4 AC133637.1-201ENST00000624115 1537 ntBASIC17.11■□□□□ 0.33
TRBV7-1A0A0A6YYK4 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV7-1A0A0A6YYK4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
TRBV7-1A0A0A6YYK4 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV7-1A0A0A6YYK4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV7-1A0A0A6YYK4 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRBV7-1A0A0A6YYK4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.1■□□□□ 0.33
TRBV7-1A0A0A6YYK4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV7-1A0A0A6YYK4 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRBV7-1A0A0A6YYK4 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV7-1A0A0A6YYK4 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV7-1A0A0A6YYK4 AC131281.2-201ENST00000520478 145 ntBASIC17.1■□□□□ 0.33
TRBV7-1A0A0A6YYK4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC17.1■□□□□ 0.33
TRBV7-1A0A0A6YYK4 AC131212.1-201ENST00000613771 668 ntBASIC17.1■□□□□ 0.33
TRBV7-1A0A0A6YYK4 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.1■□□□□ 0.33
TRBV7-1A0A0A6YYK4 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV7-1A0A0A6YYK4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.1■□□□□ 0.33
TRBV7-1A0A0A6YYK4 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.1■□□□□ 0.33
TRBV7-1A0A0A6YYK4 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV7-1A0A0A6YYK4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV7-1A0A0A6YYK4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV7-1A0A0A6YYK4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV7-1A0A0A6YYK4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV7-1A0A0A6YYK4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.09■□□□□ 0.33
TRBV7-1A0A0A6YYK4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV7-1A0A0A6YYK4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV7-1A0A0A6YYK4 AC006455.2-201ENST00000429931 906 ntBASIC17.09■□□□□ 0.33
TRBV7-1A0A0A6YYK4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.09■□□□□ 0.33
TRBV7-1A0A0A6YYK4 MIR4466-201ENST00000606121 54 ntBASIC17.09■□□□□ 0.33
TRBV7-1A0A0A6YYK4 AL138724.1-201ENST00000606771 1088 ntBASIC17.09■□□□□ 0.33
TRBV7-1A0A0A6YYK4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV7-1A0A0A6YYK4 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.09■□□□□ 0.33
TRBV7-1A0A0A6YYK4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV7-1A0A0A6YYK4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV7-1A0A0A6YYK4 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV7-1A0A0A6YYK4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV7-1A0A0A6YYK4 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TRBV7-1A0A0A6YYK4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV7-1A0A0A6YYK4 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRBV7-1A0A0A6YYK4 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRBV7-1A0A0A6YYK4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRBV7-1A0A0A6YYK4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRBV7-1A0A0A6YYK4 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRBV7-1A0A0A6YYK4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRBV7-1A0A0A6YYK4 LINC01960-201ENST00000563759 1884 ntBASIC17.08■□□□□ 0.33
TRBV7-1A0A0A6YYK4 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV7-1A0A0A6YYK4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV7-1A0A0A6YYK4 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV7-1A0A0A6YYK4 SYT6-210ENST00000641643 1587 ntBASIC17.08■□□□□ 0.32
TRBV7-1A0A0A6YYK4 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV7-1A0A0A6YYK4 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV7-1A0A0A6YYK4 MIR3181-201ENST00000578512 73 ntBASIC17.08■□□□□ 0.32
TRBV7-1A0A0A6YYK4 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.08■□□□□ 0.32
TRBV7-1A0A0A6YYK4 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV7-1A0A0A6YYK4 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV7-1A0A0A6YYK4 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV7-1A0A0A6YYK4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV7-1A0A0A6YYK4 AC127496.7-201ENST00000625110 1798 ntBASIC17.07■□□□□ 0.32
TRBV7-1A0A0A6YYK4 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.07■□□□□ 0.32
TRBV7-1A0A0A6YYK4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms