Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 AL022069.1-201ENST00000568025 1636 ntBASIC15.56■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC15.56■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC15.55■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC15.55■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC15.54■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC15.54■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 AL035685.1-201ENST00000636663 812 ntBASIC15.54■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 AC021242.3-201ENST00000607598 1377 ntBASIC15.53■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 AC239859.2-201ENST00000444165 318 ntBASIC15.53■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 AF131216.4-201ENST00000638924 1588 ntBASIC15.53■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC15.52■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 COMT-203ENST00000403184 2217 ntTSL 2 BASIC15.52■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 AL137060.1-201ENST00000618151 2648 ntBASIC15.52■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC15.52■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC15.52■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC15.52■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC15.52■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 HES6-204ENST00000409182 863 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 TRIR-205ENST00000592273 783 ntTSL 3 BASIC15.51■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 MIR4787-201ENST00000607364 84 ntBASIC15.51■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC15.5■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms