Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CCDC187A0A096LP49 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC187A0A096LP49 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC187A0A096LP49 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC187A0A096LP49 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.05■□□□□ 0.96
CCDC187A0A096LP49 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC187A0A096LP49 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.05■□□□□ 0.96
CCDC187A0A096LP49 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC187A0A096LP49 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC187A0A096LP49 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.05■□□□□ 0.96
CCDC187A0A096LP49 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC187A0A096LP49 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CCDC187A0A096LP49 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC187A0A096LP49 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC187A0A096LP49 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC187A0A096LP49 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC187A0A096LP49 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC187A0A096LP49 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC187A0A096LP49 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC187A0A096LP49 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.04■□□□□ 0.96
CCDC187A0A096LP49 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CCDC187A0A096LP49 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC187A0A096LP49 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC187A0A096LP49 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC187A0A096LP49 AC068587.7-201ENST00000641602 218 ntBASIC21.04■□□□□ 0.96
CCDC187A0A096LP49 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC187A0A096LP49 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC187A0A096LP49 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CCDC187A0A096LP49 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC187A0A096LP49 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC187A0A096LP49 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC187A0A096LP49 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC187A0A096LP49 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC187A0A096LP49 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC187A0A096LP49 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC187A0A096LP49 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC187A0A096LP49 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC187A0A096LP49 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC187A0A096LP49 AC073111.5-205ENST00000641717 521 ntBASIC21.03■□□□□ 0.96
CCDC187A0A096LP49 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC187A0A096LP49 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC187A0A096LP49 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CCDC187A0A096LP49 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC187A0A096LP49 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC187A0A096LP49 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC187A0A096LP49 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.02■□□□□ 0.96
CCDC187A0A096LP49 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC187A0A096LP49 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC187A0A096LP49 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC187A0A096LP49 BX005040.4-201ENST00000637145 1518 ntBASIC21.02■□□□□ 0.96
CCDC187A0A096LP49 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC187A0A096LP49 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
CCDC187A0A096LP49 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CCDC187A0A096LP49 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.02■□□□□ 0.95
CCDC187A0A096LP49 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC187A0A096LP49 AP004607.4-201ENST00000530158 1459 ntBASIC21.01■□□□□ 0.95
CCDC187A0A096LP49 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC187A0A096LP49 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CCDC187A0A096LP49 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC187A0A096LP49 CDCA4P2-201ENST00000441182 718 ntBASIC21.01■□□□□ 0.95
CCDC187A0A096LP49 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.01■□□□□ 0.95
CCDC187A0A096LP49 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC187A0A096LP49 RAP2CP1-201ENST00000605103 478 ntBASIC21.01■□□□□ 0.95
CCDC187A0A096LP49 AC087239.1-201ENST00000622671 572 ntBASIC21.01■□□□□ 0.95
CCDC187A0A096LP49 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC187A0A096LP49 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC187A0A096LP49 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC187A0A096LP49 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC187A0A096LP49 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC187A0A096LP49 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21■□□□□ 0.95
CCDC187A0A096LP49 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC187A0A096LP49 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21■□□□□ 0.95
CCDC187A0A096LP49 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC187A0A096LP49 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21■□□□□ 0.95
CCDC187A0A096LP49 BID-214ENST00000617586 542 ntTSL 5 BASIC21■□□□□ 0.95
CCDC187A0A096LP49 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC187A0A096LP49 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC187A0A096LP49 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC187A0A096LP49 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21■□□□□ 0.95
CCDC187A0A096LP49 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC187A0A096LP49 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC187A0A096LP49 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC187A0A096LP49 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CCDC187A0A096LP49 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC187A0A096LP49 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC187A0A096LP49 AC004854.2-201ENST00000608450 1441 ntBASIC20.99■□□□□ 0.95
CCDC187A0A096LP49 KRT19P1-201ENST00000405746 1186 ntBASIC20.99■□□□□ 0.95
CCDC187A0A096LP49 AC026185.1-201ENST00000445748 174 ntBASIC20.99■□□□□ 0.95
CCDC187A0A096LP49 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC187A0A096LP49 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.99■□□□□ 0.95
CCDC187A0A096LP49 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC187A0A096LP49 AC142381.3-201ENST00000568208 1670 ntBASIC20.99■□□□□ 0.95
CCDC187A0A096LP49 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC187A0A096LP49 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CCDC187A0A096LP49 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.98■□□□□ 0.95
CCDC187A0A096LP49 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC187A0A096LP49 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.98■□□□□ 0.95
CCDC187A0A096LP49 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.98■□□□□ 0.95
CCDC187A0A096LP49 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CCDC187A0A096LP49 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms