Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC14.27□□□□□ -0.13
SSR1P43307 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
SSR1P43307 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC14.27□□□□□ -0.13
SSR1P43307 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC14.27□□□□□ -0.13
SSR1P43307 PFN2-202ENST00000423691 911 ntTSL 2 BASIC14.27□□□□□ -0.13
SSR1P43307 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC14.27□□□□□ -0.13
SSR1P43307 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC14.27□□□□□ -0.13
SSR1P43307 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC14.27□□□□□ -0.13
SSR1P43307 RN7SL564P-201ENST00000496309 250 ntBASIC14.27□□□□□ -0.13
SSR1P43307 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SSR1P43307 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
SSR1P43307 CD44-224ENST00000526669 870 ntTSL 5 BASIC14.27□□□□□ -0.13
SSR1P43307 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC14.27□□□□□ -0.13
SSR1P43307 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC14.27□□□□□ -0.13
SSR1P43307 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC14.27□□□□□ -0.13
SSR1P43307 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC14.27□□□□□ -0.13
SSR1P43307 MIR3619-201ENST00000579667 83 ntBASIC14.27□□□□□ -0.13
SSR1P43307 AC103810.3-201ENST00000583567 96 ntBASIC14.27□□□□□ -0.13
SSR1P43307 MIR4522-201ENST00000584932 87 ntBASIC14.27□□□□□ -0.13
SSR1P43307 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14.27□□□□□ -0.13
SSR1P43307 MIR6787-201ENST00000616675 61 ntBASIC14.27□□□□□ -0.13
SSR1P43307 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
SSR1P43307 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SSR1P43307 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SSR1P43307 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SSR1P43307 ARHGEF10-203ENST00000398560 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SSR1P43307 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SSR1P43307 DOCK4-204ENST00000428084 7997 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
SSR1P43307 LINC00664-203ENST00000599078 3760 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SSR1P43307 ACSF3-201ENST00000317447 3664 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
SSR1P43307 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SSR1P43307 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.13
SSR1P43307 TMEM94-201ENST00000314256 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SSR1P43307 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC14.26□□□□□ -0.13
SSR1P43307 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSR1P43307 AC026992.2-203ENST00000563004 2419 ntBASIC14.26□□□□□ -0.13
SSR1P43307 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC14.26□□□□□ -0.13
SSR1P43307 DGCR5-203ENST00000438934 5492 ntTSL 5 BASIC14.26□□□□□ -0.13
SSR1P43307 CELF3-202ENST00000290585 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSR1P43307 DFFB-205ENST00000378209 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSR1P43307 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC14.26□□□□□ -0.13
SSR1P43307 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC14.26□□□□□ -0.13
SSR1P43307 ZC2HC1C-203ENST00000524913 4283 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SSR1P43307 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC14.26□□□□□ -0.13
SSR1P43307 CLU-202ENST00000405140 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSR1P43307 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
SSR1P43307 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC14.26□□□□□ -0.13
SSR1P43307 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC14.26□□□□□ -0.13
SSR1P43307 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
SSR1P43307 YEATS2-201ENST00000305135 6506 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSR1P43307 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC14.26□□□□□ -0.13
SSR1P43307 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSR1P43307 SERF2-206ENST00000409291 807 ntTSL 3 BASIC14.26□□□□□ -0.13
SSR1P43307 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SSR1P43307 OR52M2P-201ENST00000414298 959 ntBASIC14.26□□□□□ -0.13
SSR1P43307 AC007274.2-201ENST00000421675 662 ntBASIC14.26□□□□□ -0.13
SSR1P43307 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC14.26□□□□□ -0.13
SSR1P43307 AL512306.1-201ENST00000432698 848 ntBASIC14.26□□□□□ -0.13
SSR1P43307 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.26□□□□□ -0.13
SSR1P43307 RN7SL767P-201ENST00000493013 295 ntBASIC14.26□□□□□ -0.13
SSR1P43307 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC14.26□□□□□ -0.13
SSR1P43307 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC14.26□□□□□ -0.13
SSR1P43307 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC14.26□□□□□ -0.13
SSR1P43307 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC14.26□□□□□ -0.13
SSR1P43307 HERC2P11-201ENST00000562845 725 ntBASIC14.26□□□□□ -0.13
SSR1P43307 FGFR3P5-201ENST00000564496 886 ntBASIC14.26□□□□□ -0.13
SSR1P43307 AC100756.2-201ENST00000569537 736 ntBASIC14.26□□□□□ -0.13
SSR1P43307 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC14.26□□□□□ -0.13
SSR1P43307 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC14.26□□□□□ -0.13
SSR1P43307 LARGE1-202ENST00000397394 4138 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SSR1P43307 RMND5B-210ENST00000515098 4066 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SSR1P43307 SCN8A-215ENST00000638820 3359 ntTSL 5 BASIC14.26□□□□□ -0.13
SSR1P43307 FARS2-201ENST00000274680 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSR1P43307 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC14.26□□□□□ -0.13
SSR1P43307 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC14.26□□□□□ -0.13
SSR1P43307 AC091170.1-201ENST00000582983 2190 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SSR1P43307 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSR1P43307 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC14.26□□□□□ -0.13
SSR1P43307 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC14.26□□□□□ -0.13
SSR1P43307 AL513497.1-201ENST00000624273 2083 ntBASIC14.26□□□□□ -0.13
SSR1P43307 GPD1-201ENST00000301149 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSR1P43307 DPP3-211ENST00000532677 3078 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SSR1P43307 ITPRIP-202ENST00000337478 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSR1P43307 EHD1-201ENST00000320631 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSR1P43307 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SSR1P43307 TESPA1-202ENST00000449076 2010 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
SSR1P43307 SLC26A6-204ENST00000383733 2545 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SSR1P43307 AKNA-201ENST00000223791 4414 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
SSR1P43307 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
SSR1P43307 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
SSR1P43307 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSR1P43307 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SSR1P43307 PI4KB-201ENST00000368872 3331 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
SSR1P43307 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SSR1P43307 CPT1C-217ENST00000598293 2767 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
SSR1P43307 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSR1P43307 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSR1P43307 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSR1P43307 PDE7B-201ENST00000308191 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSR1P43307 DDX19B-208ENST00000563392 1760 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms