Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LMO3Q8TAP4 MB21D1-201ENST00000370315 3182 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LMO3Q8TAP4 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LMO3Q8TAP4 YAP1P1-201ENST00000401504 1393 ntBASIC14.12□□□□□ -0.15
LMO3Q8TAP4 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
LMO3Q8TAP4 NFATC4-212ENST00000554473 1382 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LMO3Q8TAP4 ZSCAN29-207ENST00000568898 1389 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LMO3Q8TAP4 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC14.12□□□□□ -0.15
LMO3Q8TAP4 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
LMO3Q8TAP4 BET1-201ENST00000222547 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LMO3Q8TAP4 FAM117A-209ENST00000513602 1522 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
LMO3Q8TAP4 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LMO3Q8TAP4 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LMO3Q8TAP4 SNAP25-202ENST00000304886 2050 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LMO3Q8TAP4 DLX5-201ENST00000222598 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LMO3Q8TAP4 XYLB-203ENST00000427323 1666 ntTSL 2 BASIC14.12□□□□□ -0.15
LMO3Q8TAP4 TIMP1-201ENST00000218388 892 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LMO3Q8TAP4 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC14.12□□□□□ -0.15
LMO3Q8TAP4 LCE2D-201ENST00000368784 609 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LMO3Q8TAP4 TIMP1-202ENST00000377017 626 ntTSL 2 BASIC14.12□□□□□ -0.15
LMO3Q8TAP4 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC14.12□□□□□ -0.15
LMO3Q8TAP4 AC010086.2-201ENST00000428616 226 ntBASIC14.12□□□□□ -0.15
LMO3Q8TAP4 DEFA8P-201ENST00000457582 285 ntBASIC14.12□□□□□ -0.15
LMO3Q8TAP4 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC14.12□□□□□ -0.15
LMO3Q8TAP4 F11R-204ENST00000537746 1245 ntTSL 2 BASIC14.12□□□□□ -0.15
LMO3Q8TAP4 AP003170.2-201ENST00000544730 786 ntBASIC14.12□□□□□ -0.15
LMO3Q8TAP4 GOLGA2P10-201ENST00000550961 817 ntBASIC14.12□□□□□ -0.15
LMO3Q8TAP4 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC14.12□□□□□ -0.15
LMO3Q8TAP4 CYP2B7P-202ENST00000593298 1087 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LMO3Q8TAP4 TRMT112P6-201ENST00000599234 372 ntBASIC14.12□□□□□ -0.15
LMO3Q8TAP4 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LMO3Q8TAP4 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
LMO3Q8TAP4 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LMO3Q8TAP4 TCP1-215ENST00000544255 1403 ntTSL 5 BASIC14.12□□□□□ -0.15
LMO3Q8TAP4 DZANK1-201ENST00000262547 3498 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
LMO3Q8TAP4 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LMO3Q8TAP4 DENND1C-201ENST00000381480 2816 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
LMO3Q8TAP4 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LMO3Q8TAP4 TGOLN2-206ENST00000444342 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LMO3Q8TAP4 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
LMO3Q8TAP4 TMEM185A-210ENST00000613273 1913 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LMO3Q8TAP4 PRAME-203ENST00000402697 2057 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
LMO3Q8TAP4 AP003108.3-201ENST00000623765 2234 ntBASIC14.11□□□□□ -0.15
LMO3Q8TAP4 CNOT4-204ENST00000414802 1687 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LMO3Q8TAP4 FMR1-218ENST00000621447 1832 ntTSL 3 BASIC14.11□□□□□ -0.15
LMO3Q8TAP4 PLOD2-201ENST00000282903 3732 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
LMO3Q8TAP4 TOP1MT-213ENST00000521193 1960 ntTSL 2 BASIC14.11□□□□□ -0.15
LMO3Q8TAP4 CCDC33-206ENST00000558821 1993 ntTSL 2 BASIC14.11□□□□□ -0.15
LMO3Q8TAP4 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LMO3Q8TAP4 METTL3-201ENST00000298717 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LMO3Q8TAP4 CITED1-206ENST00000431381 941 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
LMO3Q8TAP4 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC14.11□□□□□ -0.15
LMO3Q8TAP4 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LMO3Q8TAP4 CITED1-207ENST00000445983 820 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
LMO3Q8TAP4 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC14.11□□□□□ -0.15
LMO3Q8TAP4 CDK2AP2P2-201ENST00000478512 367 ntBASIC14.11□□□□□ -0.15
LMO3Q8TAP4 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC14.11□□□□□ -0.15
LMO3Q8TAP4 BACE1-207ENST00000510630 1236 ntTSL 2 BASIC14.11□□□□□ -0.15
LMO3Q8TAP4 ALG1L6P-201ENST00000515248 758 ntBASIC14.11□□□□□ -0.15
LMO3Q8TAP4 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC14.11□□□□□ -0.15
LMO3Q8TAP4 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC14.11□□□□□ -0.15
LMO3Q8TAP4 OR4A49P-201ENST00000527050 632 ntBASIC14.11□□□□□ -0.15
LMO3Q8TAP4 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC14.11□□□□□ -0.15
LMO3Q8TAP4 BMP4-205ENST00000558984 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LMO3Q8TAP4 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC14.11□□□□□ -0.15
LMO3Q8TAP4 MIR5572-201ENST00000583188 137 ntBASIC14.11□□□□□ -0.15
LMO3Q8TAP4 HRC-203ENST00000595625 2044 ntTSL 5 BASIC14.11□□□□□ -0.15
LMO3Q8TAP4 URAHP-205ENST00000610227 398 ntBASIC14.11□□□□□ -0.15
LMO3Q8TAP4 AP003419.4-201ENST00000616071 517 ntBASIC14.11□□□□□ -0.15
LMO3Q8TAP4 MIR6746-201ENST00000620971 63 ntBASIC14.11□□□□□ -0.15
LMO3Q8TAP4 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC14.11□□□□□ -0.15
LMO3Q8TAP4 LINC00431-202ENST00000636375 159 ntBASIC14.11□□□□□ -0.15
LMO3Q8TAP4 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LMO3Q8TAP4 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.11□□□□□ -0.15
LMO3Q8TAP4 CLINT1-201ENST00000411809 3440 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
LMO3Q8TAP4 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LMO3Q8TAP4 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
LMO3Q8TAP4 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
LMO3Q8TAP4 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC14.11□□□□□ -0.15
LMO3Q8TAP4 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LMO3Q8TAP4 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LMO3Q8TAP4 COPS5-203ENST00000517736 1621 ntTSL 5 BASIC14.11□□□□□ -0.15
LMO3Q8TAP4 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
LMO3Q8TAP4 CLUHP8-201ENST00000547527 1485 ntBASIC14.11□□□□□ -0.15
LMO3Q8TAP4 UBE2L3-204ENST00000545681 2932 ntTSL 2 BASIC14.11□□□□□ -0.15
LMO3Q8TAP4 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
LMO3Q8TAP4 CD36-207ENST00000432207 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LMO3Q8TAP4 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC14.11□□□□□ -0.15
LMO3Q8TAP4 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 VAMP7-201ENST00000262640 2496 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 FKBP4P8-201ENST00000610931 1369 ntBASIC14.1□□□□□ -0.15
LMO3Q8TAP4 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 ETFBKMT-205ENST00000538463 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 CRHR1-206ENST00000398285 2399 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 AC067852.6-201ENST00000591237 1736 ntBASIC14.1□□□□□ -0.15
LMO3Q8TAP4 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms