Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 SNX10-201ENST00000338523 2546 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
RAB40CQ96S21 FOXD2-AS1-201ENST00000445551 2509 ntBASIC10.86□□□□□ -0.67
RAB40CQ96S21 PPARA-202ENST00000402126 1558 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RAB40CQ96S21 PRRG4-201ENST00000257836 5530 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RAB40CQ96S21 TRIM31-210ENST00000376734 2043 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
RAB40CQ96S21 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC10.85□□□□□ -0.67
RAB40CQ96S21 AC007598.3-201ENST00000623077 1678 ntBASIC10.85□□□□□ -0.67
RAB40CQ96S21 AP001046.1-201ENST00000435702 2816 ntTSL 2 BASIC10.85□□□□□ -0.67
RAB40CQ96S21 AL357054.4-201ENST00000606285 2814 ntBASIC10.85□□□□□ -0.67
RAB40CQ96S21 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC10.85□□□□□ -0.67
RAB40CQ96S21 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC10.85□□□□□ -0.67
RAB40CQ96S21 Z97653.2-201ENST00000623057 1418 ntBASIC10.85□□□□□ -0.67
RAB40CQ96S21 HADHB-209ENST00000545822 1870 ntTSL 5 BASIC10.85□□□□□ -0.67
RAB40CQ96S21 NPC1L1-204ENST00000546276 4826 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
RAB40CQ96S21 SYNRG-229ENST00000621136 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
RAB40CQ96S21 ZC3H18-202ENST00000452588 3211 ntTSL 2 BASIC10.85□□□□□ -0.67
RAB40CQ96S21 MTERF2-207ENST00000552029 3235 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RAB40CQ96S21 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC10.85□□□□□ -0.67
RAB40CQ96S21 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC10.85□□□□□ -0.67
RAB40CQ96S21 MRO-203ENST00000428869 1966 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
RAB40CQ96S21 LINC00540-203ENST00000631321 2412 ntTSL 2 BASIC10.85□□□□□ -0.67
RAB40CQ96S21 SMTN-222ENST00000612341 3321 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
RAB40CQ96S21 HYLS1-202ENST00000425380 2061 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
RAB40CQ96S21 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC10.85□□□□□ -0.67
RAB40CQ96S21 ACOT11-201ENST00000343744 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
RAB40CQ96S21 SP7-202ENST00000536324 3151 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
RAB40CQ96S21 PPP6C-202ENST00000415905 4172 ntTSL 2 BASIC10.85□□□□□ -0.67
RAB40CQ96S21 MCM3AP-201ENST00000291688 6193 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RAB40CQ96S21 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RAB40CQ96S21 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
RAB40CQ96S21 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
RAB40CQ96S21 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
RAB40CQ96S21 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
RAB40CQ96S21 BTBD6P1-201ENST00000412176 1267 ntBASIC10.85□□□□□ -0.67
RAB40CQ96S21 EEF1DP2-201ENST00000433698 843 ntBASIC10.85□□□□□ -0.67
RAB40CQ96S21 Z93015.1-201ENST00000451718 390 ntBASIC10.85□□□□□ -0.67
RAB40CQ96S21 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
RAB40CQ96S21 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC10.85□□□□□ -0.67
RAB40CQ96S21 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
RAB40CQ96S21 AC009779.1-201ENST00000551138 283 ntBASIC10.85□□□□□ -0.67
RAB40CQ96S21 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC10.85□□□□□ -0.67
RAB40CQ96S21 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC10.85□□□□□ -0.67
RAB40CQ96S21 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RAB40CQ96S21 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC10.85□□□□□ -0.67
RAB40CQ96S21 AC026304.1-201ENST00000597953 561 ntBASIC10.85□□□□□ -0.67
RAB40CQ96S21 AL132994.2-201ENST00000603120 687 ntBASIC10.85□□□□□ -0.67
RAB40CQ96S21 AC090164.2-201ENST00000611487 516 ntBASIC10.85□□□□□ -0.67
RAB40CQ96S21 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC10.85□□□□□ -0.67
RAB40CQ96S21 CRHR1-206ENST00000398285 2399 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
RAB40CQ96S21 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC10.85□□□□□ -0.67
RAB40CQ96S21 MKL1-213ENST00000620651 3757 ntTSL 5 BASIC10.85□□□□□ -0.67
RAB40CQ96S21 SLC5A10-201ENST00000317977 4436 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
RAB40CQ96S21 ZNF44-202ENST00000355684 2119 ntAPPRIS P3 TSL 2 BASIC10.85□□□□□ -0.67
RAB40CQ96S21 GIMAP1-GIMAP5-201ENST00000611999 2148 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
RAB40CQ96S21 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC10.85□□□□□ -0.67
RAB40CQ96S21 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC10.85□□□□□ -0.67
RAB40CQ96S21 CPSF6-201ENST00000266679 2229 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
RAB40CQ96S21 DACH2-201ENST00000373125 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
RAB40CQ96S21 BX537318.2-201ENST00000624893 4162 ntBASIC10.85□□□□□ -0.67
RAB40CQ96S21 ATAD2-201ENST00000287394 5565 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RAB40CQ96S21 DNAH2-202ENST00000570791 2994 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
RAB40CQ96S21 TRPC7-203ENST00000502753 2424 ntTSL 5 BASIC10.85□□□□□ -0.67
RAB40CQ96S21 AC026992.2-203ENST00000563004 2419 ntBASIC10.85□□□□□ -0.67
RAB40CQ96S21 IQUB-202ENST00000466202 3296 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RAB40CQ96S21 PGGHG-203ENST00000409548 3687 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RAB40CQ96S21 KIAA1324-210ENST00000529753 2903 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
RAB40CQ96S21 ATP2B2-202ENST00000360273 8962 ntTSL 5 BASIC10.85□□□□□ -0.67
RAB40CQ96S21 CHST4-202ENST00000539698 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RAB40CQ96S21 TUBBP5-203ENST00000508529 1334 ntBASIC10.84□□□□□ -0.67
RAB40CQ96S21 SPART-203ENST00000451493 4944 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RAB40CQ96S21 STK24-201ENST00000376547 2492 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
RAB40CQ96S21 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RAB40CQ96S21 DTL-201ENST00000366991 4573 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RAB40CQ96S21 PRKAG1-205ENST00000547306 1531 ntTSL 5 BASIC10.84□□□□□ -0.67
RAB40CQ96S21 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC10.84□□□□□ -0.67
RAB40CQ96S21 AC008676.1-201ENST00000508443 1932 ntTSL 5 BASIC10.84□□□□□ -0.67
RAB40CQ96S21 AC007614.5-201ENST00000623424 8892 ntBASIC10.84□□□□□ -0.67
RAB40CQ96S21 GGTA1P-205ENST00000495328 3478 ntTSL 2 BASIC10.84□□□□□ -0.67
RAB40CQ96S21 CRBN-215ENST00000639284 2223 ntTSL 5 BASIC10.84□□□□□ -0.67
RAB40CQ96S21 RBM12-202ENST00000374104 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RAB40CQ96S21 AC008806.1-201ENST00000624962 2443 ntBASIC10.84□□□□□ -0.67
RAB40CQ96S21 VAX1-201ENST00000277905 4494 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RAB40CQ96S21 CA10-202ENST00000442502 2935 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RAB40CQ96S21 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RAB40CQ96S21 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC10.84□□□□□ -0.67
RAB40CQ96S21 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RAB40CQ96S21 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RAB40CQ96S21 HCG2040054-202ENST00000439182 362 ntTSL 3 BASIC10.84□□□□□ -0.67
RAB40CQ96S21 MTX1P1-201ENST00000440904 838 ntBASIC10.84□□□□□ -0.67
RAB40CQ96S21 HSPB1P2-201ENST00000448722 546 ntBASIC10.84□□□□□ -0.67
RAB40CQ96S21 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RAB40CQ96S21 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC10.84□□□□□ -0.67
RAB40CQ96S21 AC104435.2-201ENST00000478745 866 ntTSL 3 BASIC10.84□□□□□ -0.67
RAB40CQ96S21 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RAB40CQ96S21 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC10.84□□□□□ -0.67
RAB40CQ96S21 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC10.84□□□□□ -0.67
RAB40CQ96S21 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC10.84□□□□□ -0.67
RAB40CQ96S21 SNORD3B-2-202ENST00000571722 791 ntBASIC10.84□□□□□ -0.67
RAB40CQ96S21 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC10.84□□□□□ -0.67
RAB40CQ96S21 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC10.84□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms