Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 FPGT-202ENST00000370898 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TPM3P06753 TRIM32-203ENST00000450136 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TPM3P06753 IGSF11-202ENST00000393775 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TPM3P06753 QRICH1-204ENST00000424300 3009 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TPM3P06753 SHPRH-202ENST00000367503 5237 ntTSL 5 BASIC14.99□□□□□ -0.01
TPM3P06753 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TPM3P06753 KRT8P18-201ENST00000413425 1445 ntBASIC14.99□□□□□ -0.01
TPM3P06753 PIK3R5-202ENST00000447110 4495 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
TPM3P06753 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TPM3P06753 NAV2-204ENST00000396087 7882 ntTSL 5 BASIC14.99□□□□□ -0.01
TPM3P06753 DDAH1-201ENST00000284031 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TPM3P06753 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TPM3P06753 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TPM3P06753 LINC01624-203ENST00000607074 3265 ntTSL 2 BASIC14.98□□□□□ -0.01
TPM3P06753 CCDC144A-204ENST00000360524 5830 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TPM3P06753 CDCA2-202ENST00000380665 3565 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TPM3P06753 INTS6L-201ENST00000370752 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TPM3P06753 LUZP1-201ENST00000302291 8898 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TPM3P06753 HYOU1-217ENST00000612687 4360 ntTSL 5 BASIC14.98□□□□□ -0.01
TPM3P06753 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TPM3P06753 ENDOU-201ENST00000229003 2332 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TPM3P06753 OTOA-203ENST00000388957 2703 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
TPM3P06753 CYP4F11-205ENST00000620614 2908 ntTSL 5 BASIC14.98□□□□□ -0.01
TPM3P06753 CRHR2-201ENST00000341843 3131 ntTSL 5 BASIC14.98□□□□□ -0.01
TPM3P06753 LIG1-221ENST00000613670 3949 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TPM3P06753 ZIC3-201ENST00000287538 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TPM3P06753 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.98□□□□□ -0.01
TPM3P06753 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.98□□□□□ -0.01
TPM3P06753 BTBD6P1-201ENST00000412176 1267 ntBASIC14.98□□□□□ -0.01
TPM3P06753 PPP1R2P4-201ENST00000424051 595 ntBASIC14.98□□□□□ -0.01
TPM3P06753 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.98□□□□□ -0.01
TPM3P06753 HCG2040054-202ENST00000439182 362 ntTSL 3 BASIC14.98□□□□□ -0.01
TPM3P06753 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC14.98□□□□□ -0.01
TPM3P06753 CSF2RBP1-201ENST00000447905 391 ntBASIC14.98□□□□□ -0.01
TPM3P06753 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.98□□□□□ -0.01
TPM3P06753 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TPM3P06753 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.98□□□□□ -0.01
TPM3P06753 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.98□□□□□ -0.01
TPM3P06753 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.98□□□□□ -0.01
TPM3P06753 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC14.98□□□□□ -0.01
TPM3P06753 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.98□□□□□ -0.01
TPM3P06753 AC010328.2-201ENST00000597698 1111 ntBASIC14.98□□□□□ -0.01
TPM3P06753 AL133467.4-201ENST00000602953 725 ntBASIC14.98□□□□□ -0.01
TPM3P06753 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.98□□□□□ -0.01
TPM3P06753 AL033527.4-201ENST00000641026 673 ntBASIC14.98□□□□□ -0.01
TPM3P06753 LINC01544-201ENST00000567801 5168 ntTSL 2 BASIC14.98□□□□□ -0.01
TPM3P06753 C1QTNF3-202ENST00000382065 2802 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TPM3P06753 TRPC7-203ENST00000502753 2424 ntTSL 5 BASIC14.98□□□□□ -0.01
TPM3P06753 CLK3-201ENST00000345005 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TPM3P06753 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TPM3P06753 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TPM3P06753 ITPRIP-202ENST00000337478 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TPM3P06753 GRIK1-203ENST00000389125 3140 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TPM3P06753 PM20D1-201ENST00000367136 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TPM3P06753 CPPED1-203ENST00000433677 1993 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TPM3P06753 DGKH-202ENST00000337343 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TPM3P06753 AC099489.1-203ENST00000598234 10568 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TPM3P06753 ZC3H18-202ENST00000452588 3211 ntTSL 2 BASIC14.98□□□□□ -0.01
TPM3P06753 MID1IP1-204ENST00000614558 3781 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TPM3P06753 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TPM3P06753 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TPM3P06753 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC14.98□□□□□ -0.01
TPM3P06753 GRM4-204ENST00000535756 6670 ntTSL 5 BASIC14.98□□□□□ -0.01
TPM3P06753 ATAD2-201ENST00000287394 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TPM3P06753 ALDH1A2-204ENST00000537372 3700 ntTSL 2 BASIC14.97□□□□□ -0.01
TPM3P06753 RNF214-205ENST00000531287 1706 ntTSL 2 BASIC14.97□□□□□ -0.01
TPM3P06753 C3orf56-201ENST00000624688 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TPM3P06753 CSAD-201ENST00000267085 2645 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TPM3P06753 PAX6-207ENST00000379129 2614 ntAPPRIS P4 TSL 5 BASIC14.97□□□□□ -0.01
TPM3P06753 DENND3-221ENST00000523308 2959 ntTSL 2 BASIC14.97□□□□□ -0.01
TPM3P06753 LVRN-201ENST00000357872 4581 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TPM3P06753 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC14.97□□□□□ -0.01
TPM3P06753 LILRA6-203ENST00000396365 1890 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TPM3P06753 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC14.97□□□□□ -0.01
TPM3P06753 CANX-209ENST00000504734 2232 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TPM3P06753 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TPM3P06753 FARS2-201ENST00000274680 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TPM3P06753 FP325332.1-201ENST00000624818 2045 ntBASIC14.97□□□□□ -0.01
TPM3P06753 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TPM3P06753 C2orf69-201ENST00000319974 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TPM3P06753 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC14.97□□□□□ -0.01
TPM3P06753 ERVK13-1-205ENST00000568395 5578 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TPM3P06753 HEY2-202ENST00000368365 2461 ntTSL 2 BASIC14.97□□□□□ -0.01
TPM3P06753 EHD1-213ENST00000621096 3336 ntTSL 5 BASIC14.97□□□□□ -0.01
TPM3P06753 SEMA6D-206ENST00000389428 5874 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TPM3P06753 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TPM3P06753 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TPM3P06753 CLIC1-209ENST00000395892 1197 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
TPM3P06753 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.97□□□□□ -0.01
TPM3P06753 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TPM3P06753 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.97□□□□□ -0.01
TPM3P06753 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.97□□□□□ -0.01
TPM3P06753 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.97□□□□□ -0.01
TPM3P06753 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.97□□□□□ -0.01
TPM3P06753 PLEKHG5-202ENST00000377725 3475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TPM3P06753 DDX19B-208ENST00000563392 1760 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TPM3P06753 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TPM3P06753 TNIP1-201ENST00000315050 2785 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TPM3P06753 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC14.97□□□□□ -0.01
TPM3P06753 PLEKHM1-201ENST00000430334 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms