Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 ZNF544-208ENST00000596825 3516 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 KDM6A-214ENST00000621147 2876 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 HSPA4-204ENST00000615899 2204 ntTSL 5 BASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 TBC1D27-202ENST00000424239 1573 ntBASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 APBB1-223ENST00000618005 2107 ntTSL 5 BASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 RNF113A-201ENST00000371442 1353 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 OPRK1-206ENST00000613482 4682 ntTSL 5 BASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 BCAR1-203ENST00000393422 4064 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 PNPLA8-206ENST00000436062 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 GRM4-204ENST00000535756 6670 ntTSL 5 BASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 TSPYL2-201ENST00000375442 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 AC236430.1-201ENST00000402231 743 ntBASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 AC005077.3-201ENST00000449614 213 ntBASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 TUBB8P8-201ENST00000458717 1058 ntBASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 RN7SL752P-201ENST00000463779 287 ntBASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 RN7SL530P-201ENST00000485097 298 ntBASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 ELP5-212ENST00000574255 671 ntTSL 2 BASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 AC027796.2-201ENST00000575326 344 ntBASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 AC132825.4-202ENST00000578792 434 ntBASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 AC005324.6-201ENST00000587972 613 ntBASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 AC092171.5-201ENST00000608012 942 ntBASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 IP6K2-201ENST00000328631 1775 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 BCL9-201ENST00000234739 6278 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 PIGG-203ENST00000453061 3218 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 AL135999.1-201ENST00000555968 3243 ntTSL 2 BASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 SOX30-203ENST00000519442 1666 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 RBM12-202ENST00000374104 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 TTYH3-203ENST00000403167 4263 ntTSL 5 BASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 SYDE1-203ENST00000600252 3832 ntTSL 2 BASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 PANK3-201ENST00000239231 10506 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 ARHGAP36-202ENST00000370921 2447 ntTSL 2 BASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 RDH16-202ENST00000398138 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 FKBP4-201ENST00000001008 3732 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 CNTROB-202ENST00000563694 3705 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 ARHGEF10L-203ENST00000375408 3685 ntTSL 5 BASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 CAST-206ENST00000395812 4506 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 HECW2-202ENST00000409111 6692 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 ACIN1-222ENST00000557515 2751 ntTSL 5 BASIC10.94□□□□□ -0.66
RCL1Q9Y2P8 PLEKHG3-201ENST00000247226 10351 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RCL1Q9Y2P8 G2E3-202ENST00000438909 2334 ntTSL 2 BASIC10.93□□□□□ -0.66
RCL1Q9Y2P8 PHF21B-202ENST00000396103 3540 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
RCL1Q9Y2P8 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RCL1Q9Y2P8 LOXHD1-210ENST00000536736 6848 ntAPPRIS P5 TSL 5 BASIC10.93□□□□□ -0.66
RCL1Q9Y2P8 STAT1-201ENST00000361099 4310 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
RCL1Q9Y2P8 NBR1-205ENST00000589872 3097 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
RCL1Q9Y2P8 RGPD8-203ENST00000409750 5544 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
RCL1Q9Y2P8 BCL2L11-206ENST00000393256 5086 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
RCL1Q9Y2P8 ST3GAL5-204ENST00000393808 2236 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
RCL1Q9Y2P8 NR4A3-203ENST00000395097 3794 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
RCL1Q9Y2P8 CDCA7L-201ENST00000356195 2915 ntTSL 2 BASIC10.93□□□□□ -0.66
RCL1Q9Y2P8 IGSF9-202ENST00000368094 4044 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RCL1Q9Y2P8 EDRF1-201ENST00000337623 4387 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
RCL1Q9Y2P8 KDM7A-201ENST00000397560 9272 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
RCL1Q9Y2P8 AL513497.1-201ENST00000624273 2083 ntBASIC10.93□□□□□ -0.66
RCL1Q9Y2P8 ST6GAL1-215ENST00000457772 3947 ntTSL 5 BASIC10.93□□□□□ -0.66
RCL1Q9Y2P8 ZNF23-201ENST00000357254 3186 ntAPPRIS P3 TSL 2 BASIC10.93□□□□□ -0.66
RCL1Q9Y2P8 NRF1-201ENST00000223190 2424 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
RCL1Q9Y2P8 PDE7B-201ENST00000308191 5390 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RCL1Q9Y2P8 ZNF266-206ENST00000592292 3100 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
RCL1Q9Y2P8 CALM1-201ENST00000356978 4242 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
RCL1Q9Y2P8 PNPLA7-201ENST00000277531 4581 ntAPPRIS P3 TSL 2 BASIC10.93□□□□□ -0.66
RCL1Q9Y2P8 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RCL1Q9Y2P8 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RCL1Q9Y2P8 AC098614.1-201ENST00000368528 745 ntBASIC10.93□□□□□ -0.66
RCL1Q9Y2P8 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RCL1Q9Y2P8 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC10.93□□□□□ -0.66
RCL1Q9Y2P8 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
RCL1Q9Y2P8 AL627231.1-201ENST00000394467 1125 ntBASIC10.93□□□□□ -0.66
RCL1Q9Y2P8 NDUFAB1P1-201ENST00000404262 460 ntBASIC10.93□□□□□ -0.66
RCL1Q9Y2P8 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC10.93□□□□□ -0.66
RCL1Q9Y2P8 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC10.93□□□□□ -0.66
RCL1Q9Y2P8 DNAJB1P1-201ENST00000429417 1024 ntBASIC10.93□□□□□ -0.66
RCL1Q9Y2P8 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
RCL1Q9Y2P8 KRT43P-201ENST00000434019 910 ntBASIC10.93□□□□□ -0.66
RCL1Q9Y2P8 AC004895.1-202ENST00000435547 547 ntTSL 5 BASIC10.93□□□□□ -0.66
RCL1Q9Y2P8 HCG2040054-202ENST00000439182 362 ntTSL 3 BASIC10.93□□□□□ -0.66
RCL1Q9Y2P8 CYMP-203ENST00000474680 1263 ntBASIC10.93□□□□□ -0.66
RCL1Q9Y2P8 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC10.93□□□□□ -0.66
RCL1Q9Y2P8 ALG1L13P-202ENST00000519320 584 ntBASIC10.93□□□□□ -0.66
RCL1Q9Y2P8 AP000812.2-201ENST00000538934 718 ntBASIC10.93□□□□□ -0.66
RCL1Q9Y2P8 POLE2-203ENST00000553805 496 ntTSL 2 BASIC10.93□□□□□ -0.66
RCL1Q9Y2P8 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC10.93□□□□□ -0.66
RCL1Q9Y2P8 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms