Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 GEMIN5-201ENST00000285873 5397 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RAB40CQ96S21 SCN8A-215ENST00000638820 3359 ntTSL 5 BASIC10.89□□□□□ -0.67
RAB40CQ96S21 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC10.89□□□□□ -0.67
RAB40CQ96S21 DRAM1-201ENST00000258534 3519 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RAB40CQ96S21 DHX30-206ENST00000446256 3660 ntAPPRIS P2 TSL 2 BASIC10.89□□□□□ -0.67
RAB40CQ96S21 KDM3A-216ENST00000542128 4311 ntTSL 5 BASIC10.89□□□□□ -0.67
RAB40CQ96S21 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RAB40CQ96S21 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC10.89□□□□□ -0.67
RAB40CQ96S21 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
RAB40CQ96S21 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RAB40CQ96S21 PRDM11-204ENST00000530656 1536 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
RAB40CQ96S21 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC10.89□□□□□ -0.67
RAB40CQ96S21 DGKH-202ENST00000337343 4246 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RAB40CQ96S21 RASAL2-201ENST00000367649 4378 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
RAB40CQ96S21 FAM177A1-201ENST00000280987 2927 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
RAB40CQ96S21 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RAB40CQ96S21 IP6K1-201ENST00000321599 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RAB40CQ96S21 REPS1-205ENST00000415951 2424 ntTSL 5 BASIC10.88□□□□□ -0.67
RAB40CQ96S21 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
RAB40CQ96S21 BCL9-201ENST00000234739 6278 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RAB40CQ96S21 STPG4-201ENST00000294947 1621 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
RAB40CQ96S21 CD27-AS1-209ENST00000545339 1766 ntTSL 5 BASIC10.88□□□□□ -0.67
RAB40CQ96S21 SUN2-202ENST00000405510 4055 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RAB40CQ96S21 RHOH-221ENST00000615577 2227 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
RAB40CQ96S21 RHOH-223ENST00000619474 2230 ntAPPRIS P1 TSL 4 BASIC10.88□□□□□ -0.67
RAB40CQ96S21 MAML3-203ENST00000509479 6844 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RAB40CQ96S21 NUTM2A-AS1-208ENST00000446751 2394 ntTSL 2 BASIC10.88□□□□□ -0.67
RAB40CQ96S21 P2RX1-201ENST00000225538 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RAB40CQ96S21 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RAB40CQ96S21 TXNDC2-202ENST00000357775 2830 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
RAB40CQ96S21 ASB2-203ENST00000555019 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RAB40CQ96S21 IPO7-201ENST00000379719 6191 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RAB40CQ96S21 MYO19-203ENST00000610930 3271 ntTSL 5 BASIC10.88□□□□□ -0.67
RAB40CQ96S21 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC10.88□□□□□ -0.67
RAB40CQ96S21 IQSEC1-204ENST00000613206 3582 ntTSL 2 BASIC10.88□□□□□ -0.67
RAB40CQ96S21 BCL2L11-206ENST00000393256 5086 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
RAB40CQ96S21 AIMP2-201ENST00000223029 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RAB40CQ96S21 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RAB40CQ96S21 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
RAB40CQ96S21 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RAB40CQ96S21 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
RAB40CQ96S21 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
RAB40CQ96S21 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
RAB40CQ96S21 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RAB40CQ96S21 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
RAB40CQ96S21 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC10.88□□□□□ -0.67
RAB40CQ96S21 CFL1P6-201ENST00000400899 494 ntBASIC10.88□□□□□ -0.67
RAB40CQ96S21 AC004899.1-201ENST00000424687 1714 ntBASIC10.88□□□□□ -0.67
RAB40CQ96S21 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
RAB40CQ96S21 AC005076.1-201ENST00000433446 769 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
RAB40CQ96S21 WBP2-203ENST00000433525 928 ntTSL 2 BASIC10.88□□□□□ -0.67
RAB40CQ96S21 PTPA-218ENST00000435132 618 ntTSL 2 BASIC10.88□□□□□ -0.67
RAB40CQ96S21 AC004895.1-202ENST00000435547 547 ntTSL 5 BASIC10.88□□□□□ -0.67
RAB40CQ96S21 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC10.88□□□□□ -0.67
RAB40CQ96S21 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
RAB40CQ96S21 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
RAB40CQ96S21 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC10.88□□□□□ -0.67
RAB40CQ96S21 GOLGA6L4-203ENST00000510439 4563 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
RAB40CQ96S21 ALG1L13P-202ENST00000519320 584 ntBASIC10.88□□□□□ -0.67
RAB40CQ96S21 ACR-203ENST00000529621 708 ntTSL 5 BASIC10.88□□□□□ -0.67
RAB40CQ96S21 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
RAB40CQ96S21 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RAB40CQ96S21 IQSEC3P1-201ENST00000538799 536 ntBASIC10.88□□□□□ -0.67
RAB40CQ96S21 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RAB40CQ96S21 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC10.88□□□□□ -0.67
RAB40CQ96S21 AC109597.2-201ENST00000569407 927 ntTSL 3 BASIC10.88□□□□□ -0.67
RAB40CQ96S21 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
RAB40CQ96S21 MARCH10-209ENST00000583600 3214 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
RAB40CQ96S21 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC10.88□□□□□ -0.67
RAB40CQ96S21 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC10.88□□□□□ -0.67
RAB40CQ96S21 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC10.88□□□□□ -0.67
RAB40CQ96S21 AL157813.1-201ENST00000612996 587 ntBASIC10.88□□□□□ -0.67
RAB40CQ96S21 SNX14-201ENST00000314673 3486 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
RAB40CQ96S21 REV3L-201ENST00000358835 10815 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
RAB40CQ96S21 AC105402.3-202ENST00000446781 2592 ntTSL 5 BASIC10.88□□□□□ -0.67
RAB40CQ96S21 PCDHGA6-201ENST00000517434 4775 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
RAB40CQ96S21 AL391845.2-201ENST00000443930 1954 ntTSL 2 BASIC10.88□□□□□ -0.67
RAB40CQ96S21 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC10.88□□□□□ -0.67
RAB40CQ96S21 TSPEAR-201ENST00000323084 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RAB40CQ96S21 PCDHB4-201ENST00000194152 3825 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
RAB40CQ96S21 ELN-204ENST00000357036 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
RAB40CQ96S21 HACD3-201ENST00000261875 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RAB40CQ96S21 MCU-204ENST00000536019 3224 ntTSL 2 BASIC10.88□□□□□ -0.67
RAB40CQ96S21 ABCA3-201ENST00000301732 6609 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RAB40CQ96S21 SYBU-203ENST00000408889 2776 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
RAB40CQ96S21 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
RAB40CQ96S21 C2orf69-201ENST00000319974 3728 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RAB40CQ96S21 AC073335.2-201ENST00000610177 3441 ntBASIC10.87□□□□□ -0.67
RAB40CQ96S21 STRAP-202ENST00000419869 1866 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RAB40CQ96S21 SIGLEC1-201ENST00000344754 6720 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RAB40CQ96S21 HSP90AA1-202ENST00000334701 3510 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RAB40CQ96S21 RNF214-205ENST00000531287 1706 ntTSL 2 BASIC10.87□□□□□ -0.67
RAB40CQ96S21 NT5C3A-214ENST00000620705 1704 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RAB40CQ96S21 LIG1-221ENST00000613670 3949 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RAB40CQ96S21 PRKAB2-201ENST00000254101 5417 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RAB40CQ96S21 PLAT-202ENST00000352041 2516 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RAB40CQ96S21 L3MBTL1-202ENST00000373134 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
RAB40CQ96S21 VPS52-218ENST00000482399 3338 ntTSL 2 BASIC10.87□□□□□ -0.67
RAB40CQ96S21 PAPLN-208ENST00000555445 4282 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
RAB40CQ96S21 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC10.87□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms