Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 PIWIL1-201ENST00000245255 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLK1P49759 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLK1P49759 BTBD3-203ENST00000399006 4826 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
CLK1P49759 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLK1P49759 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLK1P49759 MCU-204ENST00000536019 3224 ntTSL 2 BASIC12.68□□□□□ -0.38
CLK1P49759 CCDC144A-204ENST00000360524 5830 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLK1P49759 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLK1P49759 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLK1P49759 ZNF302-203ENST00000457781 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLK1P49759 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLK1P49759 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLK1P49759 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC12.68□□□□□ -0.38
CLK1P49759 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC12.68□□□□□ -0.38
CLK1P49759 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLK1P49759 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLK1P49759 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLK1P49759 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC12.68□□□□□ -0.38
CLK1P49759 PDIA3P2-201ENST00000428073 158 ntBASIC12.68□□□□□ -0.38
CLK1P49759 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC12.68□□□□□ -0.38
CLK1P49759 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC12.68□□□□□ -0.38
CLK1P49759 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC12.68□□□□□ -0.38
CLK1P49759 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLK1P49759 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC12.68□□□□□ -0.38
CLK1P49759 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC12.68□□□□□ -0.38
CLK1P49759 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC12.68□□□□□ -0.38
CLK1P49759 AC020922.3-201ENST00000595064 547 ntBASIC12.68□□□□□ -0.38
CLK1P49759 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC12.68□□□□□ -0.38
CLK1P49759 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC12.68□□□□□ -0.38
CLK1P49759 AL021707.6-201ENST00000609212 491 ntBASIC12.68□□□□□ -0.38
CLK1P49759 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC12.68□□□□□ -0.38
CLK1P49759 AL139099.5-201ENST00000635274 300 ntBASIC12.68□□□□□ -0.38
CLK1P49759 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLK1P49759 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CLK1P49759 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLK1P49759 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC12.68□□□□□ -0.38
CLK1P49759 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC12.68□□□□□ -0.38
CLK1P49759 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLK1P49759 DPYSL2-206ENST00000523027 2130 ntTSL 2 BASIC12.68□□□□□ -0.38
CLK1P49759 PXK-210ENST00000479241 2817 ntTSL 2 BASIC12.68□□□□□ -0.38
CLK1P49759 LRRC57-201ENST00000323443 7351 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLK1P49759 MPP4-203ENST00000396886 2250 ntTSL 2 BASIC12.68□□□□□ -0.38
CLK1P49759 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC12.68□□□□□ -0.38
CLK1P49759 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC12.68□□□□□ -0.38
CLK1P49759 CAPN10-AS1-201ENST00000567819 4000 ntBASIC12.68□□□□□ -0.38
CLK1P49759 ATAD2-201ENST00000287394 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLK1P49759 PTK7-204ENST00000349241 3801 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLK1P49759 SNX14-201ENST00000314673 3486 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLK1P49759 NEK11-209ENST00000510688 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLK1P49759 IGSF9-201ENST00000361509 3996 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLK1P49759 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC12.68□□□□□ -0.38
CLK1P49759 CLINT1-201ENST00000411809 3440 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLK1P49759 NOL4L-203ENST00000359676 5991 ntTSL 2 BASIC12.68□□□□□ -0.38
CLK1P49759 MAGED1-201ENST00000326587 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLK1P49759 EME1-202ENST00000393271 2354 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CLK1P49759 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CLK1P49759 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CLK1P49759 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLK1P49759 ALDH18A1-202ENST00000371224 3359 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLK1P49759 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLK1P49759 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC12.67□□□□□ -0.38
CLK1P49759 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLK1P49759 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLK1P49759 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLK1P49759 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CLK1P49759 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLK1P49759 NMNAT2-201ENST00000287713 5663 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLK1P49759 TP53I11-220ENST00000533940 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLK1P49759 SPHK2-208ENST00000599029 3085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLK1P49759 WWP2-202ENST00000359154 4515 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLK1P49759 MED15-201ENST00000263205 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLK1P49759 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC12.67□□□□□ -0.38
CLK1P49759 PLEKHG3-201ENST00000247226 10351 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLK1P49759 DYRK4-214ENST00000543431 2068 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CLK1P49759 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLK1P49759 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLK1P49759 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLK1P49759 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CLK1P49759 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC12.67□□□□□ -0.38
CLK1P49759 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC12.67□□□□□ -0.38
CLK1P49759 CD164-210ENST00000512821 964 ntTSL 2 BASIC12.67□□□□□ -0.38
CLK1P49759 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC12.67□□□□□ -0.38
CLK1P49759 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC12.67□□□□□ -0.38
CLK1P49759 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLK1P49759 ACTG1P17-201ENST00000558391 1119 ntBASIC12.67□□□□□ -0.38
CLK1P49759 AC242376.1-201ENST00000559033 726 ntBASIC12.67□□□□□ -0.38
CLK1P49759 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CLK1P49759 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC12.67□□□□□ -0.38
CLK1P49759 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC12.67□□□□□ -0.38
CLK1P49759 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CLK1P49759 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC12.67□□□□□ -0.38
CLK1P49759 TP53-221ENST00000615910 1149 ntTSL 5 BASIC12.67□□□□□ -0.38
CLK1P49759 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC12.67□□□□□ -0.38
CLK1P49759 AC138627.1-207ENST00000641560 1006 ntBASIC12.67□□□□□ -0.38
CLK1P49759 DCAF4-213ENST00000555042 2374 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
CLK1P49759 PDE7B-201ENST00000308191 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLK1P49759 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLK1P49759 SOCS6-201ENST00000397942 5848 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLK1P49759 AC067931.2-201ENST00000623655 2003 ntBASIC12.67□□□□□ -0.38
CLK1P49759 MME-204ENST00000462745 3590 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms