Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
ZIC3O60481 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC11.96□□□□□ -0.49
ZIC3O60481 AC092570.1-201ENST00000414446 469 ntBASIC11.96□□□□□ -0.49
ZIC3O60481 SSR4P1-201ENST00000415143 412 ntBASIC11.96□□□□□ -0.49
ZIC3O60481 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC11.96□□□□□ -0.49
ZIC3O60481 RPL18AP16-201ENST00000424057 531 ntBASIC11.96□□□□□ -0.49
ZIC3O60481 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC11.96□□□□□ -0.49
ZIC3O60481 HDHD5-AS1-202ENST00000431923 616 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
ZIC3O60481 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC11.96□□□□□ -0.49
ZIC3O60481 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
ZIC3O60481 AC234582.2-201ENST00000455788 568 ntTSL 3 BASIC11.96□□□□□ -0.49
ZIC3O60481 AGPAT5P1-201ENST00000455855 1019 ntBASIC11.96□□□□□ -0.49
ZIC3O60481 AC092896.1-201ENST00000465850 380 ntBASIC11.96□□□□□ -0.49
ZIC3O60481 AC083801.1-201ENST00000491689 358 ntBASIC11.96□□□□□ -0.49
ZIC3O60481 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC11.96□□□□□ -0.49
ZIC3O60481 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
ZIC3O60481 AC025048.4-201ENST00000589740 699 ntTSL 3 BASIC11.96□□□□□ -0.49
ZIC3O60481 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC11.96□□□□□ -0.49
ZIC3O60481 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ZIC3O60481 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ZIC3O60481 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ZIC3O60481 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ZIC3O60481 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
ZIC3O60481 DLX4-206ENST00000611342 1662 ntBASIC11.96□□□□□ -0.5
ZIC3O60481 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
ZIC3O60481 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC11.96□□□□□ -0.5
ZIC3O60481 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
ZIC3O60481 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
ZIC3O60481 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
ZIC3O60481 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
ZIC3O60481 RAP1A-201ENST00000356415 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
ZIC3O60481 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
ZIC3O60481 AL356130.1-201ENST00000620188 1965 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
ZIC3O60481 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.5
ZIC3O60481 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
ZIC3O60481 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
ZIC3O60481 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
ZIC3O60481 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
ZIC3O60481 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC11.96□□□□□ -0.5
ZIC3O60481 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
ZIC3O60481 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
ZIC3O60481 ANAPC15-203ENST00000502597 1481 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ZIC3O60481 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
ZIC3O60481 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ZIC3O60481 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ZIC3O60481 ZCRB1-201ENST00000266529 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ZIC3O60481 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC11.95□□□□□ -0.5
ZIC3O60481 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC11.95□□□□□ -0.5
ZIC3O60481 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC11.95□□□□□ -0.5
ZIC3O60481 AC060814.4-201ENST00000594169 2163 ntBASIC11.95□□□□□ -0.5
ZIC3O60481 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
ZIC3O60481 GPR55-205ENST00000622008 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ZIC3O60481 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
ZIC3O60481 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC11.95□□□□□ -0.5
ZIC3O60481 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
ZIC3O60481 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ZIC3O60481 USP5-201ENST00000229268 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ZIC3O60481 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
ZIC3O60481 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
ZIC3O60481 ULBP3-201ENST00000367339 988 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
ZIC3O60481 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ZIC3O60481 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ZIC3O60481 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC11.95□□□□□ -0.5
ZIC3O60481 KRT18P33-201ENST00000398525 1043 ntBASIC11.95□□□□□ -0.5
ZIC3O60481 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ZIC3O60481 LINC00299-203ENST00000444688 537 ntTSL 4 BASIC11.95□□□□□ -0.5
ZIC3O60481 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC11.95□□□□□ -0.5
ZIC3O60481 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC11.95□□□□□ -0.5
ZIC3O60481 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
ZIC3O60481 RPL29P2-201ENST00000488409 460 ntBASIC11.95□□□□□ -0.5
ZIC3O60481 MYOZ3-205ENST00000520112 605 ntTSL 4 BASIC11.95□□□□□ -0.5
ZIC3O60481 AC131009.2-201ENST00000542763 770 ntTSL 3 BASIC11.95□□□□□ -0.5
ZIC3O60481 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC11.95□□□□□ -0.5
ZIC3O60481 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC11.95□□□□□ -0.5
ZIC3O60481 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC11.95□□□□□ -0.5
ZIC3O60481 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC11.95□□□□□ -0.5
ZIC3O60481 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC11.95□□□□□ -0.5
ZIC3O60481 SARS2-205ENST00000594171 1631 ntTSL 2 BASIC11.95□□□□□ -0.5
ZIC3O60481 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ZIC3O60481 AP002761.4-201ENST00000565433 3361 ntBASIC11.95□□□□□ -0.5
ZIC3O60481 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ZIC3O60481 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC11.95□□□□□ -0.5
ZIC3O60481 CCT8-211ENST00000540844 1927 ntTSL 2 BASIC11.95□□□□□ -0.5
ZIC3O60481 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ZIC3O60481 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
ZIC3O60481 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC11.95□□□□□ -0.5
ZIC3O60481 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
ZIC3O60481 LILRB1-202ENST00000396315 2157 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
ZIC3O60481 AGGF1P10-201ENST00000635005 2191 ntBASIC11.95□□□□□ -0.5
ZIC3O60481 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ZIC3O60481 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ZIC3O60481 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
ZIC3O60481 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC11.95□□□□□ -0.5
ZIC3O60481 CLUHP8-201ENST00000547527 1485 ntBASIC11.95□□□□□ -0.5
ZIC3O60481 FAM226B-201ENST00000602508 1490 ntBASIC11.95□□□□□ -0.5
ZIC3O60481 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
ZIC3O60481 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ZIC3O60481 CD1A-201ENST00000289429 2096 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ZIC3O60481 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZIC3O60481 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms