Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 NFE2L1-203ENST00000362042 4774 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TPM3P06753 HERC2P9-206ENST00000529624 5187 ntBASIC15.08■□□□□ 0
TPM3P06753 APBB1-223ENST00000618005 2107 ntTSL 5 BASIC15.08■□□□□ 0
TPM3P06753 WWP2-202ENST00000359154 4515 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TPM3P06753 KLHL12-203ENST00000367261 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TPM3P06753 SLC25A25-204ENST00000373069 3376 ntTSL 5 BASIC15.08■□□□□ 0
TPM3P06753 HYOU1-221ENST00000621959 3358 ntTSL 2 BASIC15.08■□□□□ 0
TPM3P06753 FBXO22-201ENST00000308275 10725 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TPM3P06753 TRAF5-203ENST00000367004 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TPM3P06753 AL031666.1-201ENST00000413818 1809 ntTSL 1 (best) BASIC15.08■□□□□ 0
TPM3P06753 ZWILCH-209ENST00000565627 1845 ntTSL 2 BASIC15.08■□□□□ 0
TPM3P06753 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC15.08■□□□□ 0
TPM3P06753 CEP83-208ENST00000547575 3122 ntTSL 2 BASIC15.08■□□□□ 0
TPM3P06753 SMG7-214ENST00000508461 3985 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
TPM3P06753 UMPS-201ENST00000232607 6738 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TPM3P06753 AC004471.2-201ENST00000609936 1514 ntTSL 3 BASIC15.07■□□□□ 0
TPM3P06753 MRO-203ENST00000428869 1966 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
TPM3P06753 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TPM3P06753 TBC1D27-202ENST00000424239 1573 ntBASIC15.07■□□□□ 0
TPM3P06753 AC099521.2-201ENST00000619354 2036 ntBASIC15.07■□□□□ 0
TPM3P06753 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC15.07■□□□□ 0
TPM3P06753 FOXD2-AS1-201ENST00000445551 2509 ntBASIC15.07■□□□□ 0
TPM3P06753 CACNA2D3-AS1-201ENST00000471265 2078 ntTSL 2 BASIC15.07■□□□□ 0
TPM3P06753 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TPM3P06753 RABL2B-201ENST00000354869 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TPM3P06753 EPN3-201ENST00000268933 4071 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TPM3P06753 TRIM37-203ENST00000393066 3622 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TPM3P06753 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC15.07■□□□□ 0
TPM3P06753 AC120114.4-201ENST00000623731 2194 ntBASIC15.07■□□□□ 0
TPM3P06753 RBM12B-201ENST00000399300 7269 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
TPM3P06753 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC15.07■□□□□ 0
TPM3P06753 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TPM3P06753 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.07■□□□□ 0
TPM3P06753 RNA5SP359-201ENST00000364838 113 ntBASIC15.07■□□□□ 0
TPM3P06753 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.07■□□□□ 0
TPM3P06753 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC15.07■□□□□ 0
TPM3P06753 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC15.07■□□□□ 0
TPM3P06753 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC15.07■□□□□ 0
TPM3P06753 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC15.07■□□□□ 0
TPM3P06753 AL132994.2-201ENST00000603120 687 ntBASIC15.07■□□□□ 0
TPM3P06753 AL021707.6-201ENST00000609212 491 ntBASIC15.07■□□□□ 0
TPM3P06753 MPPE1-202ENST00000317235 2324 ntTSL 1 (best) BASIC15.07■□□□□ 0
TPM3P06753 USP11-204ENST00000377107 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TPM3P06753 ACOT11-201ENST00000343744 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TPM3P06753 ANGEL2-208ENST00000535388 2517 ntTSL 1 (best) BASIC15.07■□□□□ 0
TPM3P06753 HYPK-201ENST00000406925 4777 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
TPM3P06753 CBL-201ENST00000264033 11231 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
TPM3P06753 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC15.07■□□□□ 0
TPM3P06753 SFMBT2-201ENST00000361972 7922 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TPM3P06753 PTK7-204ENST00000349241 3801 ntTSL 1 (best) BASIC15.07■□□□□ 0
TPM3P06753 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TPM3P06753 SPCS2-209ENST00000610881 2711 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
TPM3P06753 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC15.07■□□□□ 0
TPM3P06753 ALPL-203ENST00000374832 2193 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
TPM3P06753 PACRG-AS1-201ENST00000626335 2192 ntTSL 2 BASIC15.07■□□□□ 0
TPM3P06753 DENND1C-201ENST00000381480 2816 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
TPM3P06753 CPNE4-201ENST00000429747 4184 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TPM3P06753 ARHGAP12-203ENST00000375245 4958 ntTSL 1 (best) BASIC15.06■□□□□ 0
TPM3P06753 SH2D2A-203ENST00000392306 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TPM3P06753 RFWD3-202ENST00000571750 3033 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
TPM3P06753 FHOD3-207ENST00000591635 3035 ntTSL 5 BASIC15.06■□□□□ 0
TPM3P06753 ASAH2B-202ENST00000374007 3715 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
TPM3P06753 BCORL1-205ENST00000540052 7127 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TPM3P06753 YEATS2-201ENST00000305135 6506 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TPM3P06753 DFFB-201ENST00000338895 3105 ntTSL 2 BASIC15.06■□□□□ 0
TPM3P06753 PLEC-208ENST00000436759 14787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TPM3P06753 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC15.06■□□□□ 0
TPM3P06753 CCDC112-201ENST00000379611 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TPM3P06753 PIGC-202ENST00000367728 2630 ntAPPRIS P1 BASIC15.06■□□□□ 0
TPM3P06753 AIPL1-201ENST00000250087 2783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TPM3P06753 PRRC2A-202ENST00000376033 6893 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TPM3P06753 AC091948.1-201ENST00000501695 2033 ntTSL 2 BASIC15.06■□□□□ 0
TPM3P06753 MYT1-202ENST00000360149 2061 ntTSL 1 (best) BASIC15.06■□□□□ 0
TPM3P06753 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC15.06■□□□□ 0
TPM3P06753 ZNF44-202ENST00000355684 2119 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
TPM3P06753 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC15.06■□□□□ 0
TPM3P06753 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TPM3P06753 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC15.06■□□□□ 0
TPM3P06753 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
TPM3P06753 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TPM3P06753 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.06■□□□□ 0
TPM3P06753 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
TPM3P06753 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC15.06■□□□□ 0
TPM3P06753 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC15.06■□□□□ 0
TPM3P06753 AC009779.1-201ENST00000551138 283 ntBASIC15.06■□□□□ 0
TPM3P06753 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TPM3P06753 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC15.06■□□□□ 0
TPM3P06753 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
TPM3P06753 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.06■□□□□ 0
TPM3P06753 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC15.06■□□□□ 0
TPM3P06753 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC15.06■□□□□ 0
TPM3P06753 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.06■□□□□ 0
TPM3P06753 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.06■□□□□ 0
TPM3P06753 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.06■□□□□ 0
TPM3P06753 GARS-210ENST00000627489 324 ntTSL 4 BASIC15.06■□□□□ 0
TPM3P06753 AC068587.8-201ENST00000641239 219 ntBASIC15.06■□□□□ 0
TPM3P06753 KCNMA1-265ENST00000639591 3888 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
TPM3P06753 PRKCG-201ENST00000263431 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TPM3P06753 AC005696.4-201ENST00000614400 3147 ntBASIC15.06■□□□□ 0
TPM3P06753 RPS10P7-201ENST00000441932 2329 ntTSL 2 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms