Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 HNF1A-208ENST00000541395 3332 ntTSL 2 BASIC14.58□□□□□ -0.08
CASP4P49662 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC14.58□□□□□ -0.08
CASP4P49662 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CASP4P49662 CTBP2P8-201ENST00000422584 1330 ntBASIC14.58□□□□□ -0.08
CASP4P49662 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC14.58□□□□□ -0.08
CASP4P49662 C20orf96-203ENST00000400269 1608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CASP4P49662 RBMY1E-203ENST00000382659 1921 ntAPPRIS P5 TSL 1 (best) BASIC14.58□□□□□ -0.08
CASP4P49662 RBMY1D-202ENST00000382680 1921 ntAPPRIS P5 TSL 1 (best) BASIC14.58□□□□□ -0.08
CASP4P49662 RBMY1A1-203ENST00000382707 1921 ntAPPRIS P5 TSL 1 (best) BASIC14.58□□□□□ -0.08
CASP4P49662 RBMY1B-202ENST00000383020 1921 ntAPPRIS P5 TSL 1 (best) BASIC14.58□□□□□ -0.08
CASP4P49662 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CASP4P49662 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CASP4P49662 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CASP4P49662 ARL8B-202ENST00000419534 1684 ntTSL 2 BASIC14.58□□□□□ -0.08
CASP4P49662 DDX11L1-202ENST00000456328 1657 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CASP4P49662 DDX11L10-202ENST00000513886 1652 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CASP4P49662 DDX11L9-203ENST00000562189 1652 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CASP4P49662 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CASP4P49662 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CASP4P49662 AS3MT-202ENST00000615257 1723 ntTSL 5 BASIC14.58□□□□□ -0.08
CASP4P49662 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CASP4P49662 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CASP4P49662 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC14.58□□□□□ -0.08
CASP4P49662 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CASP4P49662 PI4KB-201ENST00000368872 3331 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
CASP4P49662 LINC00563-201ENST00000566370 1400 ntBASIC14.58□□□□□ -0.08
CASP4P49662 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CASP4P49662 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CASP4P49662 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CASP4P49662 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CASP4P49662 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CASP4P49662 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CASP4P49662 TBC1D3F-201ENST00000620210 2117 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CASP4P49662 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CASP4P49662 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
CASP4P49662 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CASP4P49662 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CASP4P49662 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CASP4P49662 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CASP4P49662 HACD3-201ENST00000261875 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CASP4P49662 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CASP4P49662 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
CASP4P49662 ZSCAN5C-202ENST00000534327 1892 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CASP4P49662 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CASP4P49662 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CASP4P49662 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CASP4P49662 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CASP4P49662 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CASP4P49662 SCN8A-215ENST00000638820 3359 ntTSL 5 BASIC14.57□□□□□ -0.08
CASP4P49662 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CASP4P49662 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CASP4P49662 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CASP4P49662 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CASP4P49662 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CASP4P49662 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC14.57□□□□□ -0.08
CASP4P49662 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC14.57□□□□□ -0.08
CASP4P49662 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC14.57□□□□□ -0.08
CASP4P49662 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC14.57□□□□□ -0.08
CASP4P49662 AC026583.1-201ENST00000561310 569 ntTSL 4 BASIC14.57□□□□□ -0.08
CASP4P49662 METTL23-211ENST00000589977 617 ntTSL 3 BASIC14.57□□□□□ -0.08
CASP4P49662 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CASP4P49662 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
CASP4P49662 AC010976.2-201ENST00000609697 852 ntBASIC14.57□□□□□ -0.08
CASP4P49662 NEAT1-204ENST00000612303 572 ntTSL 3 BASIC14.57□□□□□ -0.08
CASP4P49662 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CASP4P49662 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC14.57□□□□□ -0.08
CASP4P49662 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC14.57□□□□□ -0.08
CASP4P49662 HLA-C-210ENST00000640219 976 ntBASIC14.57□□□□□ -0.08
CASP4P49662 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC14.57□□□□□ -0.08
CASP4P49662 AC008806.1-201ENST00000624962 2443 ntBASIC14.57□□□□□ -0.08
CASP4P49662 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC14.57□□□□□ -0.08
CASP4P49662 RNF34-203ENST00000392465 2051 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
CASP4P49662 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CASP4P49662 LINC01801-202ENST00000590963 2077 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CASP4P49662 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC14.57□□□□□ -0.08
CASP4P49662 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CASP4P49662 PDE1B-203ENST00000538346 1711 ntTSL 2 BASIC14.57□□□□□ -0.08
CASP4P49662 LINC01624-203ENST00000607074 3265 ntTSL 2 BASIC14.57□□□□□ -0.08
CASP4P49662 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC14.57□□□□□ -0.08
CASP4P49662 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CASP4P49662 NEK11-202ENST00000383366 2914 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CASP4P49662 ARHGAP25-201ENST00000409030 2936 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CASP4P49662 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CASP4P49662 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CASP4P49662 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CASP4P49662 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CASP4P49662 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CASP4P49662 AC099786.2-201ENST00000427892 2203 ntTSL 2 BASIC14.57□□□□□ -0.08
CASP4P49662 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC14.57□□□□□ -0.08
CASP4P49662 MGLL-202ENST00000398101 1414 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CASP4P49662 KIAA0391-211ENST00000605870 1406 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CASP4P49662 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CASP4P49662 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC14.57□□□□□ -0.08
CASP4P49662 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CASP4P49662 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC14.56□□□□□ -0.08
CASP4P49662 C1QTNF3-202ENST00000382065 2802 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CASP4P49662 FPR2-203ENST00000598953 1544 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CASP4P49662 AC027369.3-201ENST00000530465 3707 ntBASIC14.56□□□□□ -0.08
CASP4P49662 AC092902.2-210ENST00000468859 1996 ntTSL 2 BASIC14.56□□□□□ -0.08
CASP4P49662 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms