Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.33■□□□□ 0.04
CLCN1P35523 AC104982.3-201ENST00000581995 514 ntBASIC15.33■□□□□ 0.04
CLCN1P35523 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC15.33■□□□□ 0.04
CLCN1P35523 AC005695.3-201ENST00000614522 232 ntBASIC15.33■□□□□ 0.04
CLCN1P35523 AC068587.8-201ENST00000641239 219 ntBASIC15.33■□□□□ 0.04
CLCN1P35523 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLCN1P35523 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLCN1P35523 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CLCN1P35523 FAM102A-203ENST00000373095 4144 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CLCN1P35523 FSTL1-202ENST00000424703 1396 ntTSL 2 BASIC15.33■□□□□ 0.04
CLCN1P35523 LILRB1-208ENST00000427581 2751 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CLCN1P35523 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
CLCN1P35523 TGOLN2-206ENST00000444342 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLCN1P35523 METTL13-201ENST00000361735 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLCN1P35523 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC15.33■□□□□ 0.04
CLCN1P35523 PPP1R8-201ENST00000236412 2414 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLCN1P35523 XYLT2-201ENST00000017003 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLCN1P35523 TRIM37-202ENST00000393065 3548 ntTSL 2 BASIC15.33■□□□□ 0.04
CLCN1P35523 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLCN1P35523 TMEM182-202ENST00000409528 3112 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLCN1P35523 AOC1-207ENST00000493429 3135 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CLCN1P35523 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC15.32■□□□□ 0.04
CLCN1P35523 PIGC-202ENST00000367728 2630 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CLCN1P35523 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLCN1P35523 DUSP16-201ENST00000228862 3402 ntTSL 5 BASIC15.32■□□□□ 0.04
CLCN1P35523 ELP4-202ENST00000379163 1700 ntTSL 2 BASIC15.32■□□□□ 0.04
CLCN1P35523 LEPROT-201ENST00000371065 4622 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLCN1P35523 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLCN1P35523 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CLCN1P35523 DDX19B-208ENST00000563392 1760 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLCN1P35523 JTB-202ENST00000356648 1040 ntTSL 2 BASIC15.32■□□□□ 0.04
CLCN1P35523 POM121L10P-201ENST00000436994 1285 ntBASIC15.32■□□□□ 0.04
CLCN1P35523 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC15.32■□□□□ 0.04
CLCN1P35523 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CLCN1P35523 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.32■□□□□ 0.04
CLCN1P35523 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLCN1P35523 FADS2-212ENST00000522639 360 ntTSL 5 BASIC15.32■□□□□ 0.04
CLCN1P35523 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLCN1P35523 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.32■□□□□ 0.04
CLCN1P35523 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC15.32■□□□□ 0.04
CLCN1P35523 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.32■□□□□ 0.04
CLCN1P35523 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.32■□□□□ 0.04
CLCN1P35523 FADS2-215ENST00000574708 385 ntTSL 3 BASIC15.32■□□□□ 0.04
CLCN1P35523 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC15.32■□□□□ 0.04
CLCN1P35523 AL136370.1-201ENST00000608166 691 ntBASIC15.32■□□□□ 0.04
CLCN1P35523 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.32■□□□□ 0.04
CLCN1P35523 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLCN1P35523 AL391294.1-201ENST00000641352 4068 ntBASIC15.32■□□□□ 0.04
CLCN1P35523 C19orf44-201ENST00000221671 3427 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
CLCN1P35523 PHF21B-202ENST00000396103 3540 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CLCN1P35523 TSPYL2-201ENST00000375442 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLCN1P35523 GIMAP1-GIMAP5-201ENST00000611999 2148 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CLCN1P35523 ILF3-202ENST00000407004 3671 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLCN1P35523 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC15.32■□□□□ 0.04
CLCN1P35523 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLCN1P35523 ATP4A-201ENST00000262623 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLCN1P35523 TSEN2-204ENST00000415684 2279 ntTSL 5 BASIC15.32■□□□□ 0.04
CLCN1P35523 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLCN1P35523 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLCN1P35523 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
CLCN1P35523 SF1-204ENST00000377390 3470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCN1P35523 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC15.31■□□□□ 0.04
CLCN1P35523 TJP2-209ENST00000539225 3838 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CLCN1P35523 PKD2L1-201ENST00000318222 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCN1P35523 AC091078.1-202ENST00000543286 2012 ntTSL 2 BASIC15.31■□□□□ 0.04
CLCN1P35523 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC15.31■□□□□ 0.04
CLCN1P35523 PDHA1-206ENST00000422285 3310 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCN1P35523 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLCN1P35523 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCN1P35523 IQCK-202ENST00000320394 3482 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCN1P35523 PXN-204ENST00000424649 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCN1P35523 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
CLCN1P35523 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CLCN1P35523 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CLCN1P35523 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCN1P35523 GK-202ENST00000378941 458 ntTSL 3 BASIC15.31■□□□□ 0.04
CLCN1P35523 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC15.31■□□□□ 0.04
CLCN1P35523 AC104073.2-201ENST00000453737 312 ntBASIC15.31■□□□□ 0.04
CLCN1P35523 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC15.31■□□□□ 0.04
CLCN1P35523 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLCN1P35523 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLCN1P35523 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC15.31■□□□□ 0.04
CLCN1P35523 AC140658.4-201ENST00000561990 352 ntBASIC15.31■□□□□ 0.04
CLCN1P35523 SNORD3B-2-202ENST00000571722 791 ntBASIC15.31■□□□□ 0.04
CLCN1P35523 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.31■□□□□ 0.04
CLCN1P35523 AC007663.3-201ENST00000609632 465 ntBASIC15.31■□□□□ 0.04
CLCN1P35523 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.31■□□□□ 0.04
CLCN1P35523 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLCN1P35523 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC15.31■□□□□ 0.04
CLCN1P35523 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CLCN1P35523 AC004923.1-202ENST00000642106 209 ntBASIC15.31■□□□□ 0.04
CLCN1P35523 TUBB1P2-201ENST00000422712 1306 ntBASIC15.31■□□□□ 0.04
CLCN1P35523 TUBB1P1-201ENST00000503144 1300 ntBASIC15.31■□□□□ 0.04
CLCN1P35523 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCN1P35523 DGKH-202ENST00000337343 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCN1P35523 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLCN1P35523 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC15.31■□□□□ 0.04
CLCN1P35523 SLC3A1-202ENST00000409229 2909 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLCN1P35523 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCN1P35523 AKR1B10-201ENST00000359579 1590 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms