Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HS3ST3A1Q9Y663 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.88■■□□□ 1.09
HS3ST3A1Q9Y663 AC068587.7-201ENST00000641602 218 ntBASIC21.88■■□□□ 1.09
HS3ST3A1Q9Y663 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
HS3ST3A1Q9Y663 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HS3ST3A1Q9Y663 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HS3ST3A1Q9Y663 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.87■■□□□ 1.09
HS3ST3A1Q9Y663 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HS3ST3A1Q9Y663 AL353803.4-201ENST00000565882 1934 ntBASIC21.87■■□□□ 1.09
HS3ST3A1Q9Y663 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HS3ST3A1Q9Y663 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.87■■□□□ 1.09
HS3ST3A1Q9Y663 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.87■■□□□ 1.09
HS3ST3A1Q9Y663 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.87■■□□□ 1.09
HS3ST3A1Q9Y663 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HS3ST3A1Q9Y663 MIR6084-201ENST00000622012 110 ntBASIC21.87■■□□□ 1.09
HS3ST3A1Q9Y663 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HS3ST3A1Q9Y663 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.87■■□□□ 1.09
HS3ST3A1Q9Y663 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
HS3ST3A1Q9Y663 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HS3ST3A1Q9Y663 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.87■■□□□ 1.09
HS3ST3A1Q9Y663 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.87■■□□□ 1.09
HS3ST3A1Q9Y663 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HS3ST3A1Q9Y663 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.86■■□□□ 1.09
HS3ST3A1Q9Y663 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.86■■□□□ 1.09
HS3ST3A1Q9Y663 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.86■■□□□ 1.09
HS3ST3A1Q9Y663 AL031602.1-201ENST00000633169 911 ntBASIC21.86■■□□□ 1.09
HS3ST3A1Q9Y663 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
HS3ST3A1Q9Y663 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
HS3ST3A1Q9Y663 ABCB10P4-201ENST00000566803 2184 ntBASIC21.85■■□□□ 1.09
HS3ST3A1Q9Y663 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.85■■□□□ 1.09
HS3ST3A1Q9Y663 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HS3ST3A1Q9Y663 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
HS3ST3A1Q9Y663 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
HS3ST3A1Q9Y663 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HS3ST3A1Q9Y663 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.85■■□□□ 1.09
HS3ST3A1Q9Y663 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.85■■□□□ 1.09
HS3ST3A1Q9Y663 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.85■■□□□ 1.09
HS3ST3A1Q9Y663 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
HS3ST3A1Q9Y663 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.85■■□□□ 1.09
HS3ST3A1Q9Y663 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
HS3ST3A1Q9Y663 AC105233.4-201ENST00000642045 216 ntBASIC21.85■■□□□ 1.09
HS3ST3A1Q9Y663 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HS3ST3A1Q9Y663 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HS3ST3A1Q9Y663 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
HS3ST3A1Q9Y663 AC004687.1-201ENST00000579003 1625 ntBASIC21.84■■□□□ 1.09
HS3ST3A1Q9Y663 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.84■■□□□ 1.09
HS3ST3A1Q9Y663 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.84■■□□□ 1.09
HS3ST3A1Q9Y663 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
HS3ST3A1Q9Y663 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
HS3ST3A1Q9Y663 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.84■■□□□ 1.09
HS3ST3A1Q9Y663 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
HS3ST3A1Q9Y663 DUX4L2-201ENST00000561772 1275 ntBASIC21.84■■□□□ 1.09
HS3ST3A1Q9Y663 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.84■■□□□ 1.09
HS3ST3A1Q9Y663 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.84■■□□□ 1.09
HS3ST3A1Q9Y663 DUX4L6-201ENST00000626483 1275 ntBASIC21.84■■□□□ 1.09
HS3ST3A1Q9Y663 DUX4L1-201ENST00000627662 1275 ntBASIC21.84■■□□□ 1.09
HS3ST3A1Q9Y663 DUX4L8-201ENST00000629013 1275 ntBASIC21.84■■□□□ 1.09
HS3ST3A1Q9Y663 DUX4L3-201ENST00000630187 1275 ntBASIC21.84■■□□□ 1.09
HS3ST3A1Q9Y663 DUX4L7-201ENST00000630678 1275 ntBASIC21.84■■□□□ 1.09
HS3ST3A1Q9Y663 DUX4L5-201ENST00000630834 1275 ntBASIC21.84■■□□□ 1.09
HS3ST3A1Q9Y663 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
HS3ST3A1Q9Y663 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
HS3ST3A1Q9Y663 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
HS3ST3A1Q9Y663 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
HS3ST3A1Q9Y663 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
HS3ST3A1Q9Y663 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
HS3ST3A1Q9Y663 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
HS3ST3A1Q9Y663 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.83■■□□□ 1.09
HS3ST3A1Q9Y663 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
HS3ST3A1Q9Y663 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
HS3ST3A1Q9Y663 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HS3ST3A1Q9Y663 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.82■■□□□ 1.08
HS3ST3A1Q9Y663 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.82■■□□□ 1.08
HS3ST3A1Q9Y663 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
HS3ST3A1Q9Y663 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HS3ST3A1Q9Y663 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.82■■□□□ 1.08
HS3ST3A1Q9Y663 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.82■■□□□ 1.08
HS3ST3A1Q9Y663 LINC02228-203ENST00000641970 1355 ntBASIC21.82■■□□□ 1.08
HS3ST3A1Q9Y663 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.82■■□□□ 1.08
HS3ST3A1Q9Y663 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.82■■□□□ 1.08
HS3ST3A1Q9Y663 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HS3ST3A1Q9Y663 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.81■■□□□ 1.08
HS3ST3A1Q9Y663 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
HS3ST3A1Q9Y663 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HS3ST3A1Q9Y663 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.81■■□□□ 1.08
HS3ST3A1Q9Y663 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.81■■□□□ 1.08
HS3ST3A1Q9Y663 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.81■■□□□ 1.08
HS3ST3A1Q9Y663 KRT18P5-201ENST00000436075 1291 ntBASIC21.81■■□□□ 1.08
HS3ST3A1Q9Y663 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HS3ST3A1Q9Y663 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.81■■□□□ 1.08
HS3ST3A1Q9Y663 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HS3ST3A1Q9Y663 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HS3ST3A1Q9Y663 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
HS3ST3A1Q9Y663 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HS3ST3A1Q9Y663 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HS3ST3A1Q9Y663 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HS3ST3A1Q9Y663 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HS3ST3A1Q9Y663 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.8■■□□□ 1.08
HS3ST3A1Q9Y663 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.8■■□□□ 1.08
HS3ST3A1Q9Y663 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms