Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RCL1Q9Y2P8 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RCL1Q9Y2P8 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.07■□□□□ 0.48
RCL1Q9Y2P8 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
RCL1Q9Y2P8 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.07■□□□□ 0.48
RCL1Q9Y2P8 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.07■□□□□ 0.48
RCL1Q9Y2P8 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
RCL1Q9Y2P8 AC026310.3-201ENST00000625186 2373 ntBASIC18.07■□□□□ 0.48
RCL1Q9Y2P8 ABHD17AP4-201ENST00000411545 909 ntBASIC18.07■□□□□ 0.48
RCL1Q9Y2P8 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.07■□□□□ 0.48
RCL1Q9Y2P8 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.07■□□□□ 0.48
RCL1Q9Y2P8 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.07■□□□□ 0.48
RCL1Q9Y2P8 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RCL1Q9Y2P8 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RCL1Q9Y2P8 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RCL1Q9Y2P8 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RCL1Q9Y2P8 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RCL1Q9Y2P8 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.06■□□□□ 0.48
RCL1Q9Y2P8 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RCL1Q9Y2P8 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.06■□□□□ 0.48
RCL1Q9Y2P8 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.06■□□□□ 0.48
RCL1Q9Y2P8 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RCL1Q9Y2P8 SRP68-213ENST00000629930 165 ntTSL 5 BASIC18.06■□□□□ 0.48
RCL1Q9Y2P8 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RCL1Q9Y2P8 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RCL1Q9Y2P8 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RCL1Q9Y2P8 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RCL1Q9Y2P8 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.06■□□□□ 0.48
RCL1Q9Y2P8 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
RCL1Q9Y2P8 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
RCL1Q9Y2P8 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RCL1Q9Y2P8 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RCL1Q9Y2P8 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RCL1Q9Y2P8 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
RCL1Q9Y2P8 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
RCL1Q9Y2P8 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RCL1Q9Y2P8 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.05■□□□□ 0.48
RCL1Q9Y2P8 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RCL1Q9Y2P8 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.05■□□□□ 0.48
RCL1Q9Y2P8 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RCL1Q9Y2P8 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RCL1Q9Y2P8 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RCL1Q9Y2P8 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.04■□□□□ 0.48
RCL1Q9Y2P8 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RCL1Q9Y2P8 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RCL1Q9Y2P8 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RCL1Q9Y2P8 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.04■□□□□ 0.48
RCL1Q9Y2P8 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RCL1Q9Y2P8 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC18.04■□□□□ 0.48
RCL1Q9Y2P8 CEP120-209ENST00000515110 606 ntTSL 3 BASIC18.04■□□□□ 0.48
RCL1Q9Y2P8 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RCL1Q9Y2P8 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
RCL1Q9Y2P8 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RCL1Q9Y2P8 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
RCL1Q9Y2P8 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RCL1Q9Y2P8 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RCL1Q9Y2P8 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RCL1Q9Y2P8 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
RCL1Q9Y2P8 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RCL1Q9Y2P8 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.03■□□□□ 0.48
RCL1Q9Y2P8 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.03■□□□□ 0.48
RCL1Q9Y2P8 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RCL1Q9Y2P8 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.03■□□□□ 0.48
RCL1Q9Y2P8 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RCL1Q9Y2P8 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RCL1Q9Y2P8 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.03■□□□□ 0.48
RCL1Q9Y2P8 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.03■□□□□ 0.48
RCL1Q9Y2P8 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RCL1Q9Y2P8 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.03■□□□□ 0.48
RCL1Q9Y2P8 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RCL1Q9Y2P8 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.03■□□□□ 0.48
RCL1Q9Y2P8 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RCL1Q9Y2P8 AC009831.1-201ENST00000580420 1582 ntBASIC18.03■□□□□ 0.48
RCL1Q9Y2P8 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RCL1Q9Y2P8 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RCL1Q9Y2P8 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RCL1Q9Y2P8 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RCL1Q9Y2P8 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
RCL1Q9Y2P8 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.02■□□□□ 0.48
RCL1Q9Y2P8 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RCL1Q9Y2P8 AL353803.4-201ENST00000565882 1934 ntBASIC18.02■□□□□ 0.48
RCL1Q9Y2P8 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
RCL1Q9Y2P8 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
RCL1Q9Y2P8 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RCL1Q9Y2P8 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RCL1Q9Y2P8 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.02■□□□□ 0.48
RCL1Q9Y2P8 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
RCL1Q9Y2P8 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RCL1Q9Y2P8 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
RCL1Q9Y2P8 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RCL1Q9Y2P8 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RCL1Q9Y2P8 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RCL1Q9Y2P8 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
RCL1Q9Y2P8 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
RCL1Q9Y2P8 AC087742.1-201ENST00000575880 1738 ntBASIC18.01■□□□□ 0.47
RCL1Q9Y2P8 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RCL1Q9Y2P8 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
RCL1Q9Y2P8 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RCL1Q9Y2P8 FAM99A-202ENST00000538190 1989 ntBASIC18.01■□□□□ 0.47
RCL1Q9Y2P8 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms