Protein–RNA interactions for Protein: Q9UMQ6

CAPN11, Calpain-11, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11Q9UMQ6 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24■■□□□ 1.43
CAPN11Q9UMQ6 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CAPN11Q9UMQ6 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CAPN11Q9UMQ6 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
CAPN11Q9UMQ6 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC23.99■■□□□ 1.43
CAPN11Q9UMQ6 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
CAPN11Q9UMQ6 LINC01529-204ENST00000636474 1715 ntBASIC23.99■■□□□ 1.43
CAPN11Q9UMQ6 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CAPN11Q9UMQ6 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CAPN11Q9UMQ6 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.99■■□□□ 1.43
CAPN11Q9UMQ6 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.99■■□□□ 1.43
CAPN11Q9UMQ6 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CAPN11Q9UMQ6 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CAPN11Q9UMQ6 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CAPN11Q9UMQ6 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
CAPN11Q9UMQ6 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
CAPN11Q9UMQ6 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CAPN11Q9UMQ6 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC23.98■■□□□ 1.43
CAPN11Q9UMQ6 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
CAPN11Q9UMQ6 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CAPN11Q9UMQ6 AC012354.3-201ENST00000623734 483 ntBASIC23.98■■□□□ 1.43
CAPN11Q9UMQ6 FP325331.1-202ENST00000623531 1380 ntBASIC23.98■■□□□ 1.43
CAPN11Q9UMQ6 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.98■■□□□ 1.43
CAPN11Q9UMQ6 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC23.97■■□□□ 1.43
CAPN11Q9UMQ6 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CAPN11Q9UMQ6 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
CAPN11Q9UMQ6 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CAPN11Q9UMQ6 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CAPN11Q9UMQ6 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.97■■□□□ 1.43
CAPN11Q9UMQ6 AL033527.3-201ENST00000566366 1196 ntBASIC23.97■■□□□ 1.43
CAPN11Q9UMQ6 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC23.97■■□□□ 1.43
CAPN11Q9UMQ6 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
CAPN11Q9UMQ6 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.97■■□□□ 1.43
CAPN11Q9UMQ6 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CAPN11Q9UMQ6 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
CAPN11Q9UMQ6 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CAPN11Q9UMQ6 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.96■■□□□ 1.43
CAPN11Q9UMQ6 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CAPN11Q9UMQ6 MIR6722-201ENST00000617286 78 ntBASIC23.96■■□□□ 1.43
CAPN11Q9UMQ6 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC23.96■■□□□ 1.43
CAPN11Q9UMQ6 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
CAPN11Q9UMQ6 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
CAPN11Q9UMQ6 BID-212ENST00000614949 1988 ntTSL 5 BASIC23.95■■□□□ 1.42
CAPN11Q9UMQ6 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
CAPN11Q9UMQ6 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
CAPN11Q9UMQ6 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC23.95■■□□□ 1.42
CAPN11Q9UMQ6 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.95■■□□□ 1.42
CAPN11Q9UMQ6 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CAPN11Q9UMQ6 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
CAPN11Q9UMQ6 KRT8P33-201ENST00000508125 1423 ntBASIC23.94■■□□□ 1.42
CAPN11Q9UMQ6 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CAPN11Q9UMQ6 AC005703.6-201ENST00000623265 1329 ntBASIC23.94■■□□□ 1.42
CAPN11Q9UMQ6 YBX1P4-201ENST00000392794 808 ntBASIC23.94■■□□□ 1.42
CAPN11Q9UMQ6 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.94■■□□□ 1.42
CAPN11Q9UMQ6 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.94■■□□□ 1.42
CAPN11Q9UMQ6 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.94■■□□□ 1.42
CAPN11Q9UMQ6 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CAPN11Q9UMQ6 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CAPN11Q9UMQ6 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
CAPN11Q9UMQ6 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CAPN11Q9UMQ6 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
CAPN11Q9UMQ6 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
CAPN11Q9UMQ6 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
CAPN11Q9UMQ6 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
CAPN11Q9UMQ6 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.93■■□□□ 1.42
CAPN11Q9UMQ6 EFS-203ENST00000429593 2610 ntTSL 2 BASIC23.93■■□□□ 1.42
CAPN11Q9UMQ6 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.93■■□□□ 1.42
CAPN11Q9UMQ6 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
CAPN11Q9UMQ6 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.93■■□□□ 1.42
CAPN11Q9UMQ6 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CAPN11Q9UMQ6 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
CAPN11Q9UMQ6 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
CAPN11Q9UMQ6 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC23.93■■□□□ 1.42
CAPN11Q9UMQ6 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CAPN11Q9UMQ6 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
CAPN11Q9UMQ6 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CAPN11Q9UMQ6 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CAPN11Q9UMQ6 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.92■■□□□ 1.42
CAPN11Q9UMQ6 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.92■■□□□ 1.42
CAPN11Q9UMQ6 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.92■■□□□ 1.42
CAPN11Q9UMQ6 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CAPN11Q9UMQ6 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CAPN11Q9UMQ6 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CAPN11Q9UMQ6 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CAPN11Q9UMQ6 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.91■■□□□ 1.42
CAPN11Q9UMQ6 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.91■■□□□ 1.42
CAPN11Q9UMQ6 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CAPN11Q9UMQ6 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.9■■□□□ 1.42
CAPN11Q9UMQ6 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CAPN11Q9UMQ6 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
CAPN11Q9UMQ6 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CAPN11Q9UMQ6 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23.9■■□□□ 1.42
CAPN11Q9UMQ6 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CAPN11Q9UMQ6 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CAPN11Q9UMQ6 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
CAPN11Q9UMQ6 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC23.9■■□□□ 1.42
CAPN11Q9UMQ6 AC021242.3-201ENST00000607598 1377 ntBASIC23.9■■□□□ 1.42
CAPN11Q9UMQ6 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
CAPN11Q9UMQ6 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.42
CAPN11Q9UMQ6 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms