Protein–RNA interactions for Protein: Q9UKX7

NUP50, Nuclear pore complex protein Nup50, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50Q9UKX7 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NUP50Q9UKX7 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NUP50Q9UKX7 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
NUP50Q9UKX7 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.19■□□□□ 0.66
NUP50Q9UKX7 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
NUP50Q9UKX7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.19■□□□□ 0.66
NUP50Q9UKX7 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NUP50Q9UKX7 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NUP50Q9UKX7 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NUP50Q9UKX7 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
NUP50Q9UKX7 AL391422.3-201ENST00000603791 2761 ntBASIC19.19■□□□□ 0.66
NUP50Q9UKX7 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.19■□□□□ 0.66
NUP50Q9UKX7 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NUP50Q9UKX7 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.19■□□□□ 0.66
NUP50Q9UKX7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NUP50Q9UKX7 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NUP50Q9UKX7 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
NUP50Q9UKX7 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.18■□□□□ 0.66
NUP50Q9UKX7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.18■□□□□ 0.66
NUP50Q9UKX7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.18■□□□□ 0.66
NUP50Q9UKX7 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NUP50Q9UKX7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NUP50Q9UKX7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NUP50Q9UKX7 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NUP50Q9UKX7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NUP50Q9UKX7 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NUP50Q9UKX7 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
NUP50Q9UKX7 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
NUP50Q9UKX7 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
NUP50Q9UKX7 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
NUP50Q9UKX7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
NUP50Q9UKX7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NUP50Q9UKX7 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.17■□□□□ 0.66
NUP50Q9UKX7 AC010997.5-201ENST00000609182 354 ntBASIC19.17■□□□□ 0.66
NUP50Q9UKX7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.17■□□□□ 0.66
NUP50Q9UKX7 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NUP50Q9UKX7 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NUP50Q9UKX7 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NUP50Q9UKX7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NUP50Q9UKX7 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NUP50Q9UKX7 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.16■□□□□ 0.66
NUP50Q9UKX7 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
NUP50Q9UKX7 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NUP50Q9UKX7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.16■□□□□ 0.66
NUP50Q9UKX7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.16■□□□□ 0.66
NUP50Q9UKX7 MTDHP2-201ENST00000601468 714 ntBASIC19.16■□□□□ 0.66
NUP50Q9UKX7 AP003733.4-201ENST00000623785 1697 ntBASIC19.16■□□□□ 0.66
NUP50Q9UKX7 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.16■□□□□ 0.66
NUP50Q9UKX7 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.16■□□□□ 0.66
NUP50Q9UKX7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NUP50Q9UKX7 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
NUP50Q9UKX7 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NUP50Q9UKX7 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
NUP50Q9UKX7 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NUP50Q9UKX7 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NUP50Q9UKX7 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NUP50Q9UKX7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.15■□□□□ 0.66
NUP50Q9UKX7 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.15■□□□□ 0.66
NUP50Q9UKX7 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
NUP50Q9UKX7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.15■□□□□ 0.66
NUP50Q9UKX7 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.15■□□□□ 0.66
NUP50Q9UKX7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NUP50Q9UKX7 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NUP50Q9UKX7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NUP50Q9UKX7 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
NUP50Q9UKX7 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NUP50Q9UKX7 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NUP50Q9UKX7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.14■□□□□ 0.65
NUP50Q9UKX7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.14■□□□□ 0.65
NUP50Q9UKX7 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.14■□□□□ 0.65
NUP50Q9UKX7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NUP50Q9UKX7 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NUP50Q9UKX7 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NUP50Q9UKX7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.14■□□□□ 0.65
NUP50Q9UKX7 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NUP50Q9UKX7 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NUP50Q9UKX7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.13■□□□□ 0.65
NUP50Q9UKX7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NUP50Q9UKX7 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
NUP50Q9UKX7 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NUP50Q9UKX7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.13■□□□□ 0.65
NUP50Q9UKX7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.13■□□□□ 0.65
NUP50Q9UKX7 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NUP50Q9UKX7 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NUP50Q9UKX7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.13■□□□□ 0.65
NUP50Q9UKX7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NUP50Q9UKX7 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.12■□□□□ 0.65
NUP50Q9UKX7 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NUP50Q9UKX7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NUP50Q9UKX7 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NUP50Q9UKX7 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NUP50Q9UKX7 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NUP50Q9UKX7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
NUP50Q9UKX7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.12■□□□□ 0.65
NUP50Q9UKX7 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.12■□□□□ 0.65
NUP50Q9UKX7 MIR6724-1-201ENST00000616420 92 ntBASIC19.12■□□□□ 0.65
NUP50Q9UKX7 MIR6724-2-201ENST00000616483 92 ntBASIC19.12■□□□□ 0.65
NUP50Q9UKX7 MIR6724-4-201ENST00000617390 92 ntBASIC19.12■□□□□ 0.65
NUP50Q9UKX7 MIR6724-3-201ENST00000622482 92 ntBASIC19.12■□□□□ 0.65
NUP50Q9UKX7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms