Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
MKS1Q9NXB0 AL137060.1-201ENST00000618151 2648 ntBASIC21.94■■□□□ 1.1
MKS1Q9NXB0 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.94■■□□□ 1.1
MKS1Q9NXB0 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
MKS1Q9NXB0 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
MKS1Q9NXB0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.94■■□□□ 1.1
MKS1Q9NXB0 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
MKS1Q9NXB0 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
MKS1Q9NXB0 HSD17B1P1-201ENST00000590052 955 ntBASIC21.94■■□□□ 1.1
MKS1Q9NXB0 PVT1_1.1-201ENST00000615125 194 ntBASIC21.94■■□□□ 1.1
MKS1Q9NXB0 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
MKS1Q9NXB0 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.94■■□□□ 1.1
MKS1Q9NXB0 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
MKS1Q9NXB0 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
MKS1Q9NXB0 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
MKS1Q9NXB0 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
MKS1Q9NXB0 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
MKS1Q9NXB0 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.93■■□□□ 1.1
MKS1Q9NXB0 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
MKS1Q9NXB0 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
MKS1Q9NXB0 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
MKS1Q9NXB0 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.92■■□□□ 1.1
MKS1Q9NXB0 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
MKS1Q9NXB0 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
MKS1Q9NXB0 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
MKS1Q9NXB0 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
MKS1Q9NXB0 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
MKS1Q9NXB0 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
MKS1Q9NXB0 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.92■■□□□ 1.1
MKS1Q9NXB0 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.92■■□□□ 1.1
MKS1Q9NXB0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
MKS1Q9NXB0 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
MKS1Q9NXB0 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
MKS1Q9NXB0 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
MKS1Q9NXB0 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.92■■□□□ 1.1
MKS1Q9NXB0 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
MKS1Q9NXB0 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.91■■□□□ 1.1
MKS1Q9NXB0 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MKS1Q9NXB0 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
MKS1Q9NXB0 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
MKS1Q9NXB0 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MKS1Q9NXB0 LINC01529-204ENST00000636474 1715 ntBASIC21.91■■□□□ 1.1
MKS1Q9NXB0 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MKS1Q9NXB0 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
MKS1Q9NXB0 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MKS1Q9NXB0 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MKS1Q9NXB0 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
MKS1Q9NXB0 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
MKS1Q9NXB0 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MKS1Q9NXB0 FP325331.1-202ENST00000623531 1380 ntBASIC21.9■■□□□ 1.1
MKS1Q9NXB0 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
MKS1Q9NXB0 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.9■■□□□ 1.1
MKS1Q9NXB0 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
MKS1Q9NXB0 AC010542.4-201ENST00000563151 1910 ntBASIC21.9■■□□□ 1.1
MKS1Q9NXB0 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.9■■□□□ 1.1
MKS1Q9NXB0 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MKS1Q9NXB0 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
MKS1Q9NXB0 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
MKS1Q9NXB0 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.89■■□□□ 1.1
MKS1Q9NXB0 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.89■■□□□ 1.1
MKS1Q9NXB0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
MKS1Q9NXB0 AL024507.2-201ENST00000606070 2574 ntBASIC21.89■■□□□ 1.09
MKS1Q9NXB0 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MKS1Q9NXB0 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
MKS1Q9NXB0 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.89■■□□□ 1.09
MKS1Q9NXB0 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MKS1Q9NXB0 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
MKS1Q9NXB0 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MKS1Q9NXB0 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.88■■□□□ 1.09
MKS1Q9NXB0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.88■■□□□ 1.09
MKS1Q9NXB0 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.88■■□□□ 1.09
MKS1Q9NXB0 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.88■■□□□ 1.09
MKS1Q9NXB0 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.88■■□□□ 1.09
MKS1Q9NXB0 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
MKS1Q9NXB0 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MKS1Q9NXB0 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
MKS1Q9NXB0 AC026310.3-201ENST00000625186 2373 ntBASIC21.88■■□□□ 1.09
MKS1Q9NXB0 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.87■■□□□ 1.09
MKS1Q9NXB0 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.87■■□□□ 1.09
MKS1Q9NXB0 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.87■■□□□ 1.09
MKS1Q9NXB0 NTF6A-201ENST00000591175 560 ntBASIC21.87■■□□□ 1.09
MKS1Q9NXB0 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.87■■□□□ 1.09
MKS1Q9NXB0 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.87■■□□□ 1.09
MKS1Q9NXB0 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.86■■□□□ 1.09
MKS1Q9NXB0 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.86■■□□□ 1.09
MKS1Q9NXB0 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.86■■□□□ 1.09
MKS1Q9NXB0 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
MKS1Q9NXB0 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
MKS1Q9NXB0 LINC01960-201ENST00000563759 1884 ntBASIC21.86■■□□□ 1.09
MKS1Q9NXB0 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.86■■□□□ 1.09
MKS1Q9NXB0 BHLHE23-202ENST00000612929 1109 ntBASIC21.86■■□□□ 1.09
MKS1Q9NXB0 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
MKS1Q9NXB0 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
MKS1Q9NXB0 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
MKS1Q9NXB0 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
MKS1Q9NXB0 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
MKS1Q9NXB0 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
MKS1Q9NXB0 FAM99A-202ENST00000538190 1989 ntBASIC21.85■■□□□ 1.09
MKS1Q9NXB0 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
MKS1Q9NXB0 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms