Protein–RNA interactions for Protein: Q9NTX7

RNF146, E3 ubiquitin-protein ligase RNF146, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF146Q9NTX7 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
RNF146Q9NTX7 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
RNF146Q9NTX7 LHPP-203ENST00000392757 840 ntTSL 3 BASIC25.4■■□□□ 1.66
RNF146Q9NTX7 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC25.4■■□□□ 1.66
RNF146Q9NTX7 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC25.4■■□□□ 1.66
RNF146Q9NTX7 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC25.4■■□□□ 1.66
RNF146Q9NTX7 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RNF146Q9NTX7 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
RNF146Q9NTX7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC25.39■■□□□ 1.66
RNF146Q9NTX7 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
RNF146Q9NTX7 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC25.39■■□□□ 1.66
RNF146Q9NTX7 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
RNF146Q9NTX7 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC25.39■■□□□ 1.65
RNF146Q9NTX7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
RNF146Q9NTX7 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
RNF146Q9NTX7 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.65
RNF146Q9NTX7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
RNF146Q9NTX7 AC004687.1-201ENST00000579003 1625 ntBASIC25.38■■□□□ 1.65
RNF146Q9NTX7 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RNF146Q9NTX7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC25.38■■□□□ 1.65
RNF146Q9NTX7 H19-210ENST00000439725 1929 ntTSL 2 BASIC25.38■■□□□ 1.65
RNF146Q9NTX7 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
RNF146Q9NTX7 KRT18P5-201ENST00000436075 1291 ntBASIC25.38■■□□□ 1.65
RNF146Q9NTX7 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
RNF146Q9NTX7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC25.38■■□□□ 1.65
RNF146Q9NTX7 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
RNF146Q9NTX7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC25.38■■□□□ 1.65
RNF146Q9NTX7 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RNF146Q9NTX7 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RNF146Q9NTX7 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC25.37■■□□□ 1.65
RNF146Q9NTX7 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RNF146Q9NTX7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
RNF146Q9NTX7 AL353803.4-201ENST00000565882 1934 ntBASIC25.37■■□□□ 1.65
RNF146Q9NTX7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
RNF146Q9NTX7 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC25.37■■□□□ 1.65
RNF146Q9NTX7 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC25.37■■□□□ 1.65
RNF146Q9NTX7 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC25.37■■□□□ 1.65
RNF146Q9NTX7 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
RNF146Q9NTX7 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC25.37■■□□□ 1.65
RNF146Q9NTX7 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
RNF146Q9NTX7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
RNF146Q9NTX7 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RNF146Q9NTX7 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RNF146Q9NTX7 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RNF146Q9NTX7 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
RNF146Q9NTX7 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC25.36■■□□□ 1.65
RNF146Q9NTX7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RNF146Q9NTX7 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RNF146Q9NTX7 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC25.36■■□□□ 1.65
RNF146Q9NTX7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
RNF146Q9NTX7 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
RNF146Q9NTX7 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.35■■□□□ 1.65
RNF146Q9NTX7 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RNF146Q9NTX7 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
RNF146Q9NTX7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RNF146Q9NTX7 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC25.35■■□□□ 1.65
RNF146Q9NTX7 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC25.35■■□□□ 1.65
RNF146Q9NTX7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
RNF146Q9NTX7 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
RNF146Q9NTX7 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC25.35■■□□□ 1.65
RNF146Q9NTX7 CCDC92B-201ENST00000575506 885 ntBASIC25.35■■□□□ 1.65
RNF146Q9NTX7 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC25.35■■□□□ 1.65
RNF146Q9NTX7 AC105233.4-201ENST00000642045 216 ntBASIC25.35■■□□□ 1.65
RNF146Q9NTX7 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RNF146Q9NTX7 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC25.35■■□□□ 1.65
RNF146Q9NTX7 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RNF146Q9NTX7 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
RNF146Q9NTX7 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RNF146Q9NTX7 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
RNF146Q9NTX7 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RNF146Q9NTX7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
RNF146Q9NTX7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC25.33■■□□□ 1.65
RNF146Q9NTX7 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC25.33■■□□□ 1.65
RNF146Q9NTX7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
RNF146Q9NTX7 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RNF146Q9NTX7 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
RNF146Q9NTX7 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
RNF146Q9NTX7 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RNF146Q9NTX7 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC25.33■■□□□ 1.65
RNF146Q9NTX7 MPST-204ENST00000404393 1329 ntTSL 5 BASIC25.33■■□□□ 1.64
RNF146Q9NTX7 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RNF146Q9NTX7 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC25.32■■□□□ 1.64
RNF146Q9NTX7 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC25.32■■□□□ 1.64
RNF146Q9NTX7 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
RNF146Q9NTX7 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RNF146Q9NTX7 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC25.32■■□□□ 1.64
RNF146Q9NTX7 NT5C3AP1-201ENST00000394500 1012 ntBASIC25.32■■□□□ 1.64
RNF146Q9NTX7 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RNF146Q9NTX7 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC25.32■■□□□ 1.64
RNF146Q9NTX7 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RNF146Q9NTX7 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC25.32■■□□□ 1.64
RNF146Q9NTX7 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC25.32■■□□□ 1.64
RNF146Q9NTX7 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC25.32■■□□□ 1.64
RNF146Q9NTX7 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RNF146Q9NTX7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC25.32■■□□□ 1.64
RNF146Q9NTX7 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC25.32■■□□□ 1.64
RNF146Q9NTX7 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
RNF146Q9NTX7 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC25.31■■□□□ 1.64
RNF146Q9NTX7 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC25.31■■□□□ 1.64
RNF146Q9NTX7 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms