Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC42SE1Q9NRR8 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC42SE1Q9NRR8 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
CDC42SE1Q9NRR8 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CDC42SE1Q9NRR8 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CDC42SE1Q9NRR8 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CDC42SE1Q9NRR8 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CDC42SE1Q9NRR8 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
CDC42SE1Q9NRR8 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CDC42SE1Q9NRR8 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CDC42SE1Q9NRR8 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC11.5□□□□□ -0.57
CDC42SE1Q9NRR8 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CDC42SE1Q9NRR8 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC11.5□□□□□ -0.57
CDC42SE1Q9NRR8 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CDC42SE1Q9NRR8 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CDC42SE1Q9NRR8 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
CDC42SE1Q9NRR8 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
CDC42SE1Q9NRR8 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CDC42SE1Q9NRR8 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CDC42SE1Q9NRR8 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CDC42SE1Q9NRR8 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
CDC42SE1Q9NRR8 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE1Q9NRR8 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
CDC42SE1Q9NRR8 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE1Q9NRR8 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE1Q9NRR8 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE1Q9NRR8 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
CDC42SE1Q9NRR8 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE1Q9NRR8 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC11.49□□□□□ -0.57
CDC42SE1Q9NRR8 AL157384.1-201ENST00000445995 2473 ntBASIC11.49□□□□□ -0.57
CDC42SE1Q9NRR8 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE1Q9NRR8 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
CDC42SE1Q9NRR8 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE1Q9NRR8 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
CDC42SE1Q9NRR8 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE1Q9NRR8 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE1Q9NRR8 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE1Q9NRR8 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE1Q9NRR8 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC11.49□□□□□ -0.57
CDC42SE1Q9NRR8 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE1Q9NRR8 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC11.49□□□□□ -0.57
CDC42SE1Q9NRR8 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC11.49□□□□□ -0.57
CDC42SE1Q9NRR8 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE1Q9NRR8 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
CDC42SE1Q9NRR8 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE1Q9NRR8 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
CDC42SE1Q9NRR8 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC11.48□□□□□ -0.57
CDC42SE1Q9NRR8 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC11.48□□□□□ -0.57
CDC42SE1Q9NRR8 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CDC42SE1Q9NRR8 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC11.48□□□□□ -0.57
CDC42SE1Q9NRR8 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC11.48□□□□□ -0.57
CDC42SE1Q9NRR8 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CDC42SE1Q9NRR8 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
CDC42SE1Q9NRR8 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
CDC42SE1Q9NRR8 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CDC42SE1Q9NRR8 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC11.48□□□□□ -0.57
CDC42SE1Q9NRR8 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
CDC42SE1Q9NRR8 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
CDC42SE1Q9NRR8 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC11.48□□□□□ -0.57
CDC42SE1Q9NRR8 AP002414.2-202ENST00000590929 1450 ntBASIC11.48□□□□□ -0.57
CDC42SE1Q9NRR8 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
CDC42SE1Q9NRR8 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CDC42SE1Q9NRR8 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CDC42SE1Q9NRR8 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CDC42SE1Q9NRR8 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CDC42SE1Q9NRR8 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
CDC42SE1Q9NRR8 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CDC42SE1Q9NRR8 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
CDC42SE1Q9NRR8 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CDC42SE1Q9NRR8 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CDC42SE1Q9NRR8 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CDC42SE1Q9NRR8 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC42SE1Q9NRR8 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC42SE1Q9NRR8 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC11.47□□□□□ -0.57
CDC42SE1Q9NRR8 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC11.47□□□□□ -0.57
CDC42SE1Q9NRR8 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC42SE1Q9NRR8 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
CDC42SE1Q9NRR8 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC42SE1Q9NRR8 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC42SE1Q9NRR8 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC42SE1Q9NRR8 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC11.47□□□□□ -0.57
CDC42SE1Q9NRR8 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC11.47□□□□□ -0.57
CDC42SE1Q9NRR8 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC42SE1Q9NRR8 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC42SE1Q9NRR8 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CDC42SE1Q9NRR8 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
CDC42SE1Q9NRR8 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
CDC42SE1Q9NRR8 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CDC42SE1Q9NRR8 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC11.46□□□□□ -0.57
CDC42SE1Q9NRR8 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CDC42SE1Q9NRR8 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
CDC42SE1Q9NRR8 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CDC42SE1Q9NRR8 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
CDC42SE1Q9NRR8 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC11.46□□□□□ -0.57
CDC42SE1Q9NRR8 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CDC42SE1Q9NRR8 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CDC42SE1Q9NRR8 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
CDC42SE1Q9NRR8 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC11.46□□□□□ -0.58
CDC42SE1Q9NRR8 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
CDC42SE1Q9NRR8 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms