Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
DDX4Q9NQI0 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
DDX4Q9NQI0 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
DDX4Q9NQI0 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
DDX4Q9NQI0 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
DDX4Q9NQI0 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC26.41■■□□□ 1.82
DDX4Q9NQI0 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
DDX4Q9NQI0 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC26.41■■□□□ 1.82
DDX4Q9NQI0 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC26.41■■□□□ 1.82
DDX4Q9NQI0 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
DDX4Q9NQI0 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
DDX4Q9NQI0 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
DDX4Q9NQI0 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
DDX4Q9NQI0 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
DDX4Q9NQI0 PREB-202ENST00000406567 1910 ntTSL 5 BASIC26.4■■□□□ 1.82
DDX4Q9NQI0 LHPP-203ENST00000392757 840 ntTSL 3 BASIC26.4■■□□□ 1.82
DDX4Q9NQI0 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC26.4■■□□□ 1.82
DDX4Q9NQI0 AC092437.1-201ENST00000624794 1048 ntBASIC26.4■■□□□ 1.82
DDX4Q9NQI0 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC26.4■■□□□ 1.82
DDX4Q9NQI0 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC26.4■■□□□ 1.82
DDX4Q9NQI0 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
DDX4Q9NQI0 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
DDX4Q9NQI0 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC26.39■■□□□ 1.82
DDX4Q9NQI0 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
DDX4Q9NQI0 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
DDX4Q9NQI0 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
DDX4Q9NQI0 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
DDX4Q9NQI0 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
DDX4Q9NQI0 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
DDX4Q9NQI0 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
DDX4Q9NQI0 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
DDX4Q9NQI0 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
DDX4Q9NQI0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
DDX4Q9NQI0 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
DDX4Q9NQI0 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC26.38■■□□□ 1.81
DDX4Q9NQI0 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
DDX4Q9NQI0 AC004687.1-201ENST00000579003 1625 ntBASIC26.38■■□□□ 1.81
DDX4Q9NQI0 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
DDX4Q9NQI0 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
DDX4Q9NQI0 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
DDX4Q9NQI0 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC26.37■■□□□ 1.81
DDX4Q9NQI0 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
DDX4Q9NQI0 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
DDX4Q9NQI0 TERF1P2-201ENST00000583350 1212 ntBASIC26.37■■□□□ 1.81
DDX4Q9NQI0 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC26.37■■□□□ 1.81
DDX4Q9NQI0 AL353803.4-201ENST00000565882 1934 ntBASIC26.37■■□□□ 1.81
DDX4Q9NQI0 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC26.36■■□□□ 1.81
DDX4Q9NQI0 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC26.36■■□□□ 1.81
DDX4Q9NQI0 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
DDX4Q9NQI0 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
DDX4Q9NQI0 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
DDX4Q9NQI0 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
DDX4Q9NQI0 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC26.36■■□□□ 1.81
DDX4Q9NQI0 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
DDX4Q9NQI0 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
DDX4Q9NQI0 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
DDX4Q9NQI0 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
DDX4Q9NQI0 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC26.35■■□□□ 1.81
DDX4Q9NQI0 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC26.35■■□□□ 1.81
DDX4Q9NQI0 AC105233.4-201ENST00000642045 216 ntBASIC26.35■■□□□ 1.81
DDX4Q9NQI0 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
DDX4Q9NQI0 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC26.35■■□□□ 1.81
DDX4Q9NQI0 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
DDX4Q9NQI0 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC26.34■■□□□ 1.81
DDX4Q9NQI0 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC26.34■■□□□ 1.81
DDX4Q9NQI0 KRT18P14-201ENST00000534205 1250 ntBASIC26.34■■□□□ 1.81
DDX4Q9NQI0 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC26.34■■□□□ 1.81
DDX4Q9NQI0 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
DDX4Q9NQI0 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
DDX4Q9NQI0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC26.33■■□□□ 1.81
DDX4Q9NQI0 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC26.33■■□□□ 1.81
DDX4Q9NQI0 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC26.33■■□□□ 1.81
DDX4Q9NQI0 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
DDX4Q9NQI0 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
DDX4Q9NQI0 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC26.33■■□□□ 1.81
DDX4Q9NQI0 NT5C3AP1-201ENST00000394500 1012 ntBASIC26.33■■□□□ 1.81
DDX4Q9NQI0 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
DDX4Q9NQI0 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC26.33■■□□□ 1.81
DDX4Q9NQI0 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC26.33■■□□□ 1.81
DDX4Q9NQI0 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
DDX4Q9NQI0 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
DDX4Q9NQI0 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
DDX4Q9NQI0 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
DDX4Q9NQI0 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
DDX4Q9NQI0 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
DDX4Q9NQI0 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC26.32■■□□□ 1.8
DDX4Q9NQI0 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
DDX4Q9NQI0 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC26.32■■□□□ 1.8
DDX4Q9NQI0 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
DDX4Q9NQI0 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
DDX4Q9NQI0 RARA-203ENST00000394086 2008 ntTSL 2 BASIC26.32■■□□□ 1.8
DDX4Q9NQI0 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC26.32■■□□□ 1.8
DDX4Q9NQI0 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
DDX4Q9NQI0 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
DDX4Q9NQI0 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC26.31■■□□□ 1.8
DDX4Q9NQI0 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
DDX4Q9NQI0 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
DDX4Q9NQI0 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
DDX4Q9NQI0 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
DDX4Q9NQI0 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC26.31■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms