Protein–RNA interactions for Protein: Q9H6I2

SOX17, Transcription factor SOX-17, humanhuman

Predicted RBP Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17Q9H6I2 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.38■■□□□ 1.01
SOX17Q9H6I2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SOX17Q9H6I2 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SOX17Q9H6I2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SOX17Q9H6I2 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
SOX17Q9H6I2 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SOX17Q9H6I2 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
SOX17Q9H6I2 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SOX17Q9H6I2 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SOX17Q9H6I2 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
SOX17Q9H6I2 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SOX17Q9H6I2 ALDH1A3-203ENST00000557963 1670 ntBASIC21.37■■□□□ 1.01
SOX17Q9H6I2 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
SOX17Q9H6I2 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SOX17Q9H6I2 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.37■■□□□ 1.01
SOX17Q9H6I2 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SOX17Q9H6I2 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
SOX17Q9H6I2 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.37■■□□□ 1.01
SOX17Q9H6I2 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.37■■□□□ 1.01
SOX17Q9H6I2 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SOX17Q9H6I2 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
SOX17Q9H6I2 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SOX17Q9H6I2 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
SOX17Q9H6I2 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SOX17Q9H6I2 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SOX17Q9H6I2 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SOX17Q9H6I2 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SOX17Q9H6I2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SOX17Q9H6I2 AL136162.1-201ENST00000607711 1078 ntBASIC21.36■■□□□ 1.01
SOX17Q9H6I2 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
SOX17Q9H6I2 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
SOX17Q9H6I2 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
SOX17Q9H6I2 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SOX17Q9H6I2 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.36■■□□□ 1.01
SOX17Q9H6I2 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SOX17Q9H6I2 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SOX17Q9H6I2 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SOX17Q9H6I2 AC005837.3-201ENST00000612163 286 ntBASIC21.35■■□□□ 1.01
SOX17Q9H6I2 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SOX17Q9H6I2 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SOX17Q9H6I2 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SOX17Q9H6I2 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SOX17Q9H6I2 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SOX17Q9H6I2 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.35■■□□□ 1.01
SOX17Q9H6I2 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
SOX17Q9H6I2 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SOX17Q9H6I2 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SOX17Q9H6I2 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.34■■□□□ 1.01
SOX17Q9H6I2 AC106739.1-201ENST00000617035 715 ntBASIC21.34■■□□□ 1.01
SOX17Q9H6I2 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SOX17Q9H6I2 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SOX17Q9H6I2 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
SOX17Q9H6I2 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SOX17Q9H6I2 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SOX17Q9H6I2 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SOX17Q9H6I2 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SOX17Q9H6I2 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.33■■□□□ 1.01
SOX17Q9H6I2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SOX17Q9H6I2 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
SOX17Q9H6I2 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.33■■□□□ 1.01
SOX17Q9H6I2 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SOX17Q9H6I2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
SOX17Q9H6I2 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SOX17Q9H6I2 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SOX17Q9H6I2 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.33■■□□□ 1.01
SOX17Q9H6I2 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.33■■□□□ 1.01
SOX17Q9H6I2 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SOX17Q9H6I2 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.33■■□□□ 1
SOX17Q9H6I2 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
SOX17Q9H6I2 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
SOX17Q9H6I2 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.33■■□□□ 1
SOX17Q9H6I2 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SOX17Q9H6I2 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.32■■□□□ 1
SOX17Q9H6I2 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SOX17Q9H6I2 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.32■■□□□ 1
SOX17Q9H6I2 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SOX17Q9H6I2 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.32■■□□□ 1
SOX17Q9H6I2 AC099791.2-201ENST00000605725 427 ntBASIC21.32■■□□□ 1
SOX17Q9H6I2 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.32■■□□□ 1
SOX17Q9H6I2 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.32■■□□□ 1
SOX17Q9H6I2 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SOX17Q9H6I2 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.32■■□□□ 1
SOX17Q9H6I2 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.32■■□□□ 1
SOX17Q9H6I2 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SOX17Q9H6I2 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SOX17Q9H6I2 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.31■■□□□ 1
SOX17Q9H6I2 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SOX17Q9H6I2 AC135279.3-201ENST00000610945 1311 ntBASIC21.31■■□□□ 1
SOX17Q9H6I2 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SOX17Q9H6I2 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.31■■□□□ 1
SOX17Q9H6I2 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
SOX17Q9H6I2 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.31■■□□□ 1
SOX17Q9H6I2 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.31■■□□□ 1
SOX17Q9H6I2 AC024257.2-201ENST00000549699 147 ntBASIC21.31■■□□□ 1
SOX17Q9H6I2 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.31■■□□□ 1
SOX17Q9H6I2 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.31■■□□□ 1
SOX17Q9H6I2 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
SOX17Q9H6I2 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SOX17Q9H6I2 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SOX17Q9H6I2 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms