Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.04■■□□□ 1.28
CDK5RAP1Q96SZ6 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CDK5RAP1Q96SZ6 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.03■■□□□ 1.28
CDK5RAP1Q96SZ6 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.03■■□□□ 1.28
CDK5RAP1Q96SZ6 IRS3P-201ENST00000223076 1006 ntBASIC23.03■■□□□ 1.28
CDK5RAP1Q96SZ6 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
CDK5RAP1Q96SZ6 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CDK5RAP1Q96SZ6 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC23.03■■□□□ 1.28
CDK5RAP1Q96SZ6 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.03■■□□□ 1.28
CDK5RAP1Q96SZ6 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
CDK5RAP1Q96SZ6 AC068587.7-201ENST00000641602 218 ntBASIC23.03■■□□□ 1.28
CDK5RAP1Q96SZ6 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CDK5RAP1Q96SZ6 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
CDK5RAP1Q96SZ6 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CDK5RAP1Q96SZ6 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
CDK5RAP1Q96SZ6 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
CDK5RAP1Q96SZ6 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CDK5RAP1Q96SZ6 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CDK5RAP1Q96SZ6 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CDK5RAP1Q96SZ6 MIR935-201ENST00000401179 91 ntBASIC23.02■■□□□ 1.28
CDK5RAP1Q96SZ6 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CDK5RAP1Q96SZ6 STOX2-205ENST00000513034 807 ntTSL 3 BASIC23.02■■□□□ 1.28
CDK5RAP1Q96SZ6 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC23.02■■□□□ 1.28
CDK5RAP1Q96SZ6 AC010525.1-201ENST00000585559 441 ntBASIC23.02■■□□□ 1.28
CDK5RAP1Q96SZ6 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CDK5RAP1Q96SZ6 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CDK5RAP1Q96SZ6 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
CDK5RAP1Q96SZ6 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.01■■□□□ 1.27
CDK5RAP1Q96SZ6 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDK5RAP1Q96SZ6 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.01■■□□□ 1.27
CDK5RAP1Q96SZ6 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.01■■□□□ 1.27
CDK5RAP1Q96SZ6 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDK5RAP1Q96SZ6 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDK5RAP1Q96SZ6 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDK5RAP1Q96SZ6 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.01■■□□□ 1.27
CDK5RAP1Q96SZ6 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CDK5RAP1Q96SZ6 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23■■□□□ 1.27
CDK5RAP1Q96SZ6 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23■■□□□ 1.27
CDK5RAP1Q96SZ6 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23■■□□□ 1.27
CDK5RAP1Q96SZ6 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23■■□□□ 1.27
CDK5RAP1Q96SZ6 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
CDK5RAP1Q96SZ6 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
CDK5RAP1Q96SZ6 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23■■□□□ 1.27
CDK5RAP1Q96SZ6 TSPY26P-201ENST00000476365 1326 ntBASIC23■■□□□ 1.27
CDK5RAP1Q96SZ6 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.99■■□□□ 1.27
CDK5RAP1Q96SZ6 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CDK5RAP1Q96SZ6 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC22.99■■□□□ 1.27
CDK5RAP1Q96SZ6 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.99■■□□□ 1.27
CDK5RAP1Q96SZ6 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CDK5RAP1Q96SZ6 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC22.99■■□□□ 1.27
CDK5RAP1Q96SZ6 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
CDK5RAP1Q96SZ6 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.98■■□□□ 1.27
CDK5RAP1Q96SZ6 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CDK5RAP1Q96SZ6 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CDK5RAP1Q96SZ6 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CDK5RAP1Q96SZ6 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CDK5RAP1Q96SZ6 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CDK5RAP1Q96SZ6 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22.98■■□□□ 1.27
CDK5RAP1Q96SZ6 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC22.98■■□□□ 1.27
CDK5RAP1Q96SZ6 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
CDK5RAP1Q96SZ6 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
CDK5RAP1Q96SZ6 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.97■■□□□ 1.27
CDK5RAP1Q96SZ6 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CDK5RAP1Q96SZ6 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CDK5RAP1Q96SZ6 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CDK5RAP1Q96SZ6 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC22.97■■□□□ 1.27
CDK5RAP1Q96SZ6 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CDK5RAP1Q96SZ6 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.96■■□□□ 1.27
CDK5RAP1Q96SZ6 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
CDK5RAP1Q96SZ6 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CDK5RAP1Q96SZ6 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
CDK5RAP1Q96SZ6 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
CDK5RAP1Q96SZ6 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.96■■□□□ 1.27
CDK5RAP1Q96SZ6 AC087239.1-201ENST00000622671 572 ntBASIC22.96■■□□□ 1.27
CDK5RAP1Q96SZ6 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
CDK5RAP1Q96SZ6 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
CDK5RAP1Q96SZ6 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
CDK5RAP1Q96SZ6 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CDK5RAP1Q96SZ6 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.27
CDK5RAP1Q96SZ6 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.27
CDK5RAP1Q96SZ6 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CDK5RAP1Q96SZ6 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC22.95■■□□□ 1.26
CDK5RAP1Q96SZ6 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CDK5RAP1Q96SZ6 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
CDK5RAP1Q96SZ6 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CDK5RAP1Q96SZ6 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CDK5RAP1Q96SZ6 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC22.95■■□□□ 1.26
CDK5RAP1Q96SZ6 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CDK5RAP1Q96SZ6 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
CDK5RAP1Q96SZ6 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CDK5RAP1Q96SZ6 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
CDK5RAP1Q96SZ6 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.94■■□□□ 1.26
CDK5RAP1Q96SZ6 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CDK5RAP1Q96SZ6 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.94■■□□□ 1.26
CDK5RAP1Q96SZ6 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
CDK5RAP1Q96SZ6 MIR572-201ENST00000384983 95 ntBASIC22.94■■□□□ 1.26
CDK5RAP1Q96SZ6 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CDK5RAP1Q96SZ6 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CDK5RAP1Q96SZ6 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.94■■□□□ 1.26
CDK5RAP1Q96SZ6 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms