Protein–RNA interactions for Protein: Q96QV6

HIST1H2AA, Histone H2A type 1-A, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AAQ96QV6 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.1■□□□□ 0.65
HIST1H2AAQ96QV6 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
HIST1H2AAQ96QV6 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIST1H2AAQ96QV6 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.1■□□□□ 0.65
HIST1H2AAQ96QV6 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.1■□□□□ 0.65
HIST1H2AAQ96QV6 MIR6724-1-201ENST00000616420 92 ntBASIC19.1■□□□□ 0.65
HIST1H2AAQ96QV6 MIR6724-2-201ENST00000616483 92 ntBASIC19.1■□□□□ 0.65
HIST1H2AAQ96QV6 MIR6724-4-201ENST00000617390 92 ntBASIC19.1■□□□□ 0.65
HIST1H2AAQ96QV6 MIR6724-3-201ENST00000622482 92 ntBASIC19.1■□□□□ 0.65
HIST1H2AAQ96QV6 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIST1H2AAQ96QV6 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIST1H2AAQ96QV6 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIST1H2AAQ96QV6 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIST1H2AAQ96QV6 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIST1H2AAQ96QV6 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.1■□□□□ 0.65
HIST1H2AAQ96QV6 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.09■□□□□ 0.65
HIST1H2AAQ96QV6 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HIST1H2AAQ96QV6 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.09■□□□□ 0.65
HIST1H2AAQ96QV6 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
HIST1H2AAQ96QV6 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HIST1H2AAQ96QV6 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.09■□□□□ 0.65
HIST1H2AAQ96QV6 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIST1H2AAQ96QV6 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIST1H2AAQ96QV6 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
HIST1H2AAQ96QV6 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
HIST1H2AAQ96QV6 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIST1H2AAQ96QV6 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIST1H2AAQ96QV6 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIST1H2AAQ96QV6 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
HIST1H2AAQ96QV6 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIST1H2AAQ96QV6 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIST1H2AAQ96QV6 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
HIST1H2AAQ96QV6 KRT16P3-201ENST00000439127 1283 ntBASIC19.09■□□□□ 0.65
HIST1H2AAQ96QV6 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.09■□□□□ 0.65
HIST1H2AAQ96QV6 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.09■□□□□ 0.65
HIST1H2AAQ96QV6 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.09■□□□□ 0.65
HIST1H2AAQ96QV6 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HIST1H2AAQ96QV6 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIST1H2AAQ96QV6 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIST1H2AAQ96QV6 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIST1H2AAQ96QV6 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIST1H2AAQ96QV6 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
HIST1H2AAQ96QV6 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
HIST1H2AAQ96QV6 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
HIST1H2AAQ96QV6 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
HIST1H2AAQ96QV6 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.08■□□□□ 0.64
HIST1H2AAQ96QV6 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
HIST1H2AAQ96QV6 UNC93B8-201ENST00000511903 705 ntBASIC19.08■□□□□ 0.64
HIST1H2AAQ96QV6 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HIST1H2AAQ96QV6 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.08■□□□□ 0.64
HIST1H2AAQ96QV6 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.64
HIST1H2AAQ96QV6 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
HIST1H2AAQ96QV6 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HIST1H2AAQ96QV6 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
HIST1H2AAQ96QV6 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.08■□□□□ 0.64
HIST1H2AAQ96QV6 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HIST1H2AAQ96QV6 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HIST1H2AAQ96QV6 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
HIST1H2AAQ96QV6 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HIST1H2AAQ96QV6 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
HIST1H2AAQ96QV6 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HIST1H2AAQ96QV6 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
HIST1H2AAQ96QV6 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
HIST1H2AAQ96QV6 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HIST1H2AAQ96QV6 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.07■□□□□ 0.64
HIST1H2AAQ96QV6 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
HIST1H2AAQ96QV6 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HIST1H2AAQ96QV6 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.07■□□□□ 0.64
HIST1H2AAQ96QV6 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HIST1H2AAQ96QV6 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HIST1H2AAQ96QV6 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.06■□□□□ 0.64
HIST1H2AAQ96QV6 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.06■□□□□ 0.64
HIST1H2AAQ96QV6 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
HIST1H2AAQ96QV6 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HIST1H2AAQ96QV6 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HIST1H2AAQ96QV6 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
HIST1H2AAQ96QV6 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.06■□□□□ 0.64
HIST1H2AAQ96QV6 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
HIST1H2AAQ96QV6 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HIST1H2AAQ96QV6 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
HIST1H2AAQ96QV6 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.05■□□□□ 0.64
HIST1H2AAQ96QV6 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HIST1H2AAQ96QV6 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.05■□□□□ 0.64
HIST1H2AAQ96QV6 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
HIST1H2AAQ96QV6 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HIST1H2AAQ96QV6 AC009102.2-201ENST00000606772 1639 ntBASIC19.05■□□□□ 0.64
HIST1H2AAQ96QV6 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HIST1H2AAQ96QV6 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
HIST1H2AAQ96QV6 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.05■□□□□ 0.64
HIST1H2AAQ96QV6 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.05■□□□□ 0.64
HIST1H2AAQ96QV6 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.05■□□□□ 0.64
HIST1H2AAQ96QV6 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.05■□□□□ 0.64
HIST1H2AAQ96QV6 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HIST1H2AAQ96QV6 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
HIST1H2AAQ96QV6 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HIST1H2AAQ96QV6 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HIST1H2AAQ96QV6 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HIST1H2AAQ96QV6 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HIST1H2AAQ96QV6 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
HIST1H2AAQ96QV6 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms