Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC16.35■□□□□ 0.21
ODF3Q96PU9 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
ODF3Q96PU9 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ODF3Q96PU9 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC16.35■□□□□ 0.21
ODF3Q96PU9 C17orf82-201ENST00000623772 1530 ntBASIC16.35■□□□□ 0.21
ODF3Q96PU9 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ODF3Q96PU9 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ODF3Q96PU9 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
ODF3Q96PU9 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC16.34■□□□□ 0.21
ODF3Q96PU9 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ODF3Q96PU9 NKILA-201ENST00000613231 537 ntTSL 4 BASIC16.34■□□□□ 0.21
ODF3Q96PU9 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC16.34■□□□□ 0.21
ODF3Q96PU9 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ODF3Q96PU9 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ODF3Q96PU9 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ODF3Q96PU9 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC16.34■□□□□ 0.21
ODF3Q96PU9 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC16.34■□□□□ 0.21
ODF3Q96PU9 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
ODF3Q96PU9 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
ODF3Q96PU9 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.21
ODF3Q96PU9 LSR-203ENST00000360798 1963 ntTSL 2 BASIC16.33■□□□□ 0.21
ODF3Q96PU9 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC16.33■□□□□ 0.21
ODF3Q96PU9 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ODF3Q96PU9 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ODF3Q96PU9 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ODF3Q96PU9 HES6-204ENST00000409182 863 ntTSL 2 BASIC16.33■□□□□ 0.2
ODF3Q96PU9 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
ODF3Q96PU9 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
ODF3Q96PU9 MIR6724-1-201ENST00000616420 92 ntBASIC16.33■□□□□ 0.2
ODF3Q96PU9 MIR6724-2-201ENST00000616483 92 ntBASIC16.33■□□□□ 0.2
ODF3Q96PU9 MIR6724-4-201ENST00000617390 92 ntBASIC16.33■□□□□ 0.2
ODF3Q96PU9 MIR6724-3-201ENST00000622482 92 ntBASIC16.33■□□□□ 0.2
ODF3Q96PU9 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC16.33■□□□□ 0.2
ODF3Q96PU9 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ODF3Q96PU9 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
ODF3Q96PU9 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
ODF3Q96PU9 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ODF3Q96PU9 LSM4-201ENST00000252816 986 ntTSL 2 BASIC16.32■□□□□ 0.2
ODF3Q96PU9 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ODF3Q96PU9 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ODF3Q96PU9 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ODF3Q96PU9 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ODF3Q96PU9 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
ODF3Q96PU9 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ODF3Q96PU9 TSPY9P-201ENST00000440215 945 ntBASIC16.32■□□□□ 0.2
ODF3Q96PU9 TSPY11P-201ENST00000442607 1045 ntBASIC16.32■□□□□ 0.2
ODF3Q96PU9 AC087742.1-201ENST00000575880 1738 ntBASIC16.32■□□□□ 0.2
ODF3Q96PU9 AL451085.2-201ENST00000605085 799 ntBASIC16.32■□□□□ 0.2
ODF3Q96PU9 VGF-203ENST00000611537 1622 ntTSL 5 BASIC16.32■□□□□ 0.2
ODF3Q96PU9 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ODF3Q96PU9 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ODF3Q96PU9 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ODF3Q96PU9 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ODF3Q96PU9 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ODF3Q96PU9 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ODF3Q96PU9 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ODF3Q96PU9 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ODF3Q96PU9 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ODF3Q96PU9 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ODF3Q96PU9 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ODF3Q96PU9 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC16.31■□□□□ 0.2
ODF3Q96PU9 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ODF3Q96PU9 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ODF3Q96PU9 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ODF3Q96PU9 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
ODF3Q96PU9 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
ODF3Q96PU9 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC16.31■□□□□ 0.2
ODF3Q96PU9 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC16.31■□□□□ 0.2
ODF3Q96PU9 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ODF3Q96PU9 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ODF3Q96PU9 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
ODF3Q96PU9 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC16.3■□□□□ 0.2
ODF3Q96PU9 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ODF3Q96PU9 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ODF3Q96PU9 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ODF3Q96PU9 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ODF3Q96PU9 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
ODF3Q96PU9 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC16.3■□□□□ 0.2
ODF3Q96PU9 AC092053.2-201ENST00000640557 1818 ntBASIC16.3■□□□□ 0.2
ODF3Q96PU9 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ODF3Q96PU9 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ODF3Q96PU9 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ODF3Q96PU9 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ODF3Q96PU9 LINC01960-201ENST00000563759 1884 ntBASIC16.29■□□□□ 0.2
ODF3Q96PU9 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC16.29■□□□□ 0.2
ODF3Q96PU9 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ODF3Q96PU9 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC16.29■□□□□ 0.2
ODF3Q96PU9 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ODF3Q96PU9 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ODF3Q96PU9 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC16.29■□□□□ 0.2
ODF3Q96PU9 AC241377.3-202ENST00000626088 1088 ntBASIC16.29■□□□□ 0.2
ODF3Q96PU9 AC241585.3-202ENST00000628937 1088 ntBASIC16.29■□□□□ 0.2
ODF3Q96PU9 AC245100.8-202ENST00000629247 1058 ntBASIC16.29■□□□□ 0.2
ODF3Q96PU9 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
ODF3Q96PU9 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ODF3Q96PU9 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ODF3Q96PU9 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ODF3Q96PU9 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ODF3Q96PU9 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC16.29■□□□□ 0.2
ODF3Q96PU9 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms