Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
MS4A4EQ96PG1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.65■□□□□ 0.9
MS4A4EQ96PG1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MS4A4EQ96PG1 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
MS4A4EQ96PG1 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MS4A4EQ96PG1 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
MS4A4EQ96PG1 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.65■□□□□ 0.9
MS4A4EQ96PG1 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
MS4A4EQ96PG1 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MS4A4EQ96PG1 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.65■□□□□ 0.9
MS4A4EQ96PG1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
MS4A4EQ96PG1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
MS4A4EQ96PG1 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MS4A4EQ96PG1 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.64■□□□□ 0.89
MS4A4EQ96PG1 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MS4A4EQ96PG1 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MS4A4EQ96PG1 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
MS4A4EQ96PG1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MS4A4EQ96PG1 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
MS4A4EQ96PG1 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
MS4A4EQ96PG1 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
MS4A4EQ96PG1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.63■□□□□ 0.89
MS4A4EQ96PG1 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MS4A4EQ96PG1 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MS4A4EQ96PG1 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MS4A4EQ96PG1 AL117328.2-201ENST00000624617 1940 ntBASIC20.63■□□□□ 0.89
MS4A4EQ96PG1 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
MS4A4EQ96PG1 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MS4A4EQ96PG1 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.63■□□□□ 0.89
MS4A4EQ96PG1 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.63■□□□□ 0.89
MS4A4EQ96PG1 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
MS4A4EQ96PG1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MS4A4EQ96PG1 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MS4A4EQ96PG1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.62■□□□□ 0.89
MS4A4EQ96PG1 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.62■□□□□ 0.89
MS4A4EQ96PG1 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MS4A4EQ96PG1 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MS4A4EQ96PG1 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
MS4A4EQ96PG1 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.62■□□□□ 0.89
MS4A4EQ96PG1 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.62■□□□□ 0.89
MS4A4EQ96PG1 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.62■□□□□ 0.89
MS4A4EQ96PG1 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.62■□□□□ 0.89
MS4A4EQ96PG1 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MS4A4EQ96PG1 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.62■□□□□ 0.89
MS4A4EQ96PG1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.62■□□□□ 0.89
MS4A4EQ96PG1 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MS4A4EQ96PG1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
MS4A4EQ96PG1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
MS4A4EQ96PG1 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MS4A4EQ96PG1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MS4A4EQ96PG1 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MS4A4EQ96PG1 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MS4A4EQ96PG1 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
MS4A4EQ96PG1 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.61■□□□□ 0.89
MS4A4EQ96PG1 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MS4A4EQ96PG1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
MS4A4EQ96PG1 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MS4A4EQ96PG1 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MS4A4EQ96PG1 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MS4A4EQ96PG1 AC004687.1-201ENST00000579003 1625 ntBASIC20.6■□□□□ 0.89
MS4A4EQ96PG1 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MS4A4EQ96PG1 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MS4A4EQ96PG1 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MS4A4EQ96PG1 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.6■□□□□ 0.89
MS4A4EQ96PG1 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.6■□□□□ 0.89
MS4A4EQ96PG1 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.6■□□□□ 0.89
MS4A4EQ96PG1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.6■□□□□ 0.89
MS4A4EQ96PG1 AL499627.2-201ENST00000606283 725 ntBASIC20.6■□□□□ 0.89
MS4A4EQ96PG1 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MS4A4EQ96PG1 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MS4A4EQ96PG1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.6■□□□□ 0.89
MS4A4EQ96PG1 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MS4A4EQ96PG1 GUSBP5-202ENST00000510805 1989 ntBASIC20.59■□□□□ 0.89
MS4A4EQ96PG1 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MS4A4EQ96PG1 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.59■□□□□ 0.89
MS4A4EQ96PG1 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
MS4A4EQ96PG1 SRD5A1P1-201ENST00000442297 786 ntBASIC20.59■□□□□ 0.89
MS4A4EQ96PG1 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.59■□□□□ 0.89
MS4A4EQ96PG1 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.59■□□□□ 0.89
MS4A4EQ96PG1 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.59■□□□□ 0.89
MS4A4EQ96PG1 AL512631.2-201ENST00000604634 923 ntBASIC20.59■□□□□ 0.89
MS4A4EQ96PG1 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.59■□□□□ 0.89
MS4A4EQ96PG1 AC127496.7-201ENST00000625110 1798 ntBASIC20.59■□□□□ 0.89
MS4A4EQ96PG1 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
MS4A4EQ96PG1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
MS4A4EQ96PG1 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
MS4A4EQ96PG1 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MS4A4EQ96PG1 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.58■□□□□ 0.89
MS4A4EQ96PG1 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
MS4A4EQ96PG1 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.58■□□□□ 0.89
MS4A4EQ96PG1 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
MS4A4EQ96PG1 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
MS4A4EQ96PG1 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.58■□□□□ 0.88
MS4A4EQ96PG1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
MS4A4EQ96PG1 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
MS4A4EQ96PG1 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
MS4A4EQ96PG1 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
MS4A4EQ96PG1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
MS4A4EQ96PG1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
MS4A4EQ96PG1 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms