Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
APH1AQ96BI3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
APH1AQ96BI3 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
APH1AQ96BI3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
APH1AQ96BI3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
APH1AQ96BI3 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
APH1AQ96BI3 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
APH1AQ96BI3 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
APH1AQ96BI3 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.6■□□□□ 0.73
APH1AQ96BI3 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.6■□□□□ 0.73
APH1AQ96BI3 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
APH1AQ96BI3 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
APH1AQ96BI3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.59■□□□□ 0.73
APH1AQ96BI3 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
APH1AQ96BI3 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
APH1AQ96BI3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
APH1AQ96BI3 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
APH1AQ96BI3 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
APH1AQ96BI3 AC142381.2-201ENST00000566120 298 ntBASIC19.59■□□□□ 0.73
APH1AQ96BI3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.59■□□□□ 0.73
APH1AQ96BI3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
APH1AQ96BI3 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
APH1AQ96BI3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
APH1AQ96BI3 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.59■□□□□ 0.73
APH1AQ96BI3 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.59■□□□□ 0.73
APH1AQ96BI3 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
APH1AQ96BI3 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
APH1AQ96BI3 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
APH1AQ96BI3 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
APH1AQ96BI3 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
APH1AQ96BI3 AC004687.1-201ENST00000579003 1625 ntBASIC19.58■□□□□ 0.73
APH1AQ96BI3 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.58■□□□□ 0.73
APH1AQ96BI3 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
APH1AQ96BI3 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.58■□□□□ 0.72
APH1AQ96BI3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.58■□□□□ 0.72
APH1AQ96BI3 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
APH1AQ96BI3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
APH1AQ96BI3 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.58■□□□□ 0.72
APH1AQ96BI3 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
APH1AQ96BI3 DUSP8P3-201ENST00000399571 1760 ntBASIC19.57■□□□□ 0.72
APH1AQ96BI3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
APH1AQ96BI3 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
APH1AQ96BI3 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
APH1AQ96BI3 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.57■□□□□ 0.72
APH1AQ96BI3 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
APH1AQ96BI3 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
APH1AQ96BI3 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
APH1AQ96BI3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.57■□□□□ 0.72
APH1AQ96BI3 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
APH1AQ96BI3 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.57■□□□□ 0.72
APH1AQ96BI3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
APH1AQ96BI3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.57■□□□□ 0.72
APH1AQ96BI3 AP001330.3-201ENST00000520123 633 ntBASIC19.57■□□□□ 0.72
APH1AQ96BI3 AC027682.1-201ENST00000562846 899 ntBASIC19.57■□□□□ 0.72
APH1AQ96BI3 AF213884.3-201ENST00000563833 479 ntBASIC19.57■□□□□ 0.72
APH1AQ96BI3 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
APH1AQ96BI3 AL031432.3-201ENST00000607698 485 ntBASIC19.57■□□□□ 0.72
APH1AQ96BI3 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.57■□□□□ 0.72
APH1AQ96BI3 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
APH1AQ96BI3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
APH1AQ96BI3 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
APH1AQ96BI3 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
APH1AQ96BI3 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
APH1AQ96BI3 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
APH1AQ96BI3 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.56■□□□□ 0.72
APH1AQ96BI3 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
APH1AQ96BI3 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
APH1AQ96BI3 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
APH1AQ96BI3 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
APH1AQ96BI3 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
APH1AQ96BI3 BX842568.3-201ENST00000418104 571 ntBASIC19.56■□□□□ 0.72
APH1AQ96BI3 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.56■□□□□ 0.72
APH1AQ96BI3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
APH1AQ96BI3 AC008764.7-201ENST00000593779 1081 ntBASIC19.56■□□□□ 0.72
APH1AQ96BI3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
APH1AQ96BI3 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.56■□□□□ 0.72
APH1AQ96BI3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
APH1AQ96BI3 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
APH1AQ96BI3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.56■□□□□ 0.72
APH1AQ96BI3 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
APH1AQ96BI3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
APH1AQ96BI3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
APH1AQ96BI3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
APH1AQ96BI3 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
APH1AQ96BI3 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
APH1AQ96BI3 MIR939-201ENST00000401314 82 ntBASIC19.55■□□□□ 0.72
APH1AQ96BI3 OR2I1P-207ENST00000453522 948 ntBASIC19.55■□□□□ 0.72
APH1AQ96BI3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.55■□□□□ 0.72
APH1AQ96BI3 AC233992.3-201ENST00000607491 485 ntBASIC19.55■□□□□ 0.72
APH1AQ96BI3 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
APH1AQ96BI3 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.54■□□□□ 0.72
APH1AQ96BI3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
APH1AQ96BI3 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
APH1AQ96BI3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.54■□□□□ 0.72
APH1AQ96BI3 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
APH1AQ96BI3 SUDS3P1-201ENST00000505831 966 ntBASIC19.54■□□□□ 0.72
APH1AQ96BI3 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.54■□□□□ 0.72
APH1AQ96BI3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
APH1AQ96BI3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.54■□□□□ 0.72
APH1AQ96BI3 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 780 ms