Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
SMARCC1Q92922 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
SMARCC1Q92922 AP003733.4-201ENST00000623785 1697 ntBASIC28.7■■■□□ 2.18
SMARCC1Q92922 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
SMARCC1Q92922 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
SMARCC1Q92922 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
SMARCC1Q92922 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
SMARCC1Q92922 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC28.69■■■□□ 2.18
SMARCC1Q92922 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
SMARCC1Q92922 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC28.69■■■□□ 2.18
SMARCC1Q92922 AC004854.2-201ENST00000608450 1441 ntBASIC28.69■■■□□ 2.18
SMARCC1Q92922 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
SMARCC1Q92922 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC28.68■■■□□ 2.18
SMARCC1Q92922 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC28.68■■■□□ 2.18
SMARCC1Q92922 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC28.68■■■□□ 2.18
SMARCC1Q92922 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC28.68■■■□□ 2.18
SMARCC1Q92922 AC104771.1-201ENST00000603335 964 ntBASIC28.68■■■□□ 2.18
SMARCC1Q92922 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC28.68■■■□□ 2.18
SMARCC1Q92922 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
SMARCC1Q92922 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
SMARCC1Q92922 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
SMARCC1Q92922 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
SMARCC1Q92922 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
SMARCC1Q92922 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
SMARCC1Q92922 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
SMARCC1Q92922 EI24-213ENST00000618552 1747 ntTSL 5 BASIC28.66■■■□□ 2.18
SMARCC1Q92922 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC28.66■■■□□ 2.18
SMARCC1Q92922 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SMARCC1Q92922 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC28.66■■■□□ 2.18
SMARCC1Q92922 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
SMARCC1Q92922 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC28.66■■■□□ 2.18
SMARCC1Q92922 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
SMARCC1Q92922 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC28.66■■■□□ 2.18
SMARCC1Q92922 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SMARCC1Q92922 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SMARCC1Q92922 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
SMARCC1Q92922 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC28.65■■■□□ 2.18
SMARCC1Q92922 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SMARCC1Q92922 BX005040.4-201ENST00000637145 1518 ntBASIC28.65■■■□□ 2.18
SMARCC1Q92922 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SMARCC1Q92922 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SMARCC1Q92922 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC28.65■■■□□ 2.18
SMARCC1Q92922 KRT19P1-201ENST00000405746 1186 ntBASIC28.65■■■□□ 2.18
SMARCC1Q92922 MAP2K4P1-201ENST00000438453 1195 ntBASIC28.65■■■□□ 2.18
SMARCC1Q92922 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
SMARCC1Q92922 WWOX-218ENST00000627394 894 ntTSL 5 BASIC28.65■■■□□ 2.18
SMARCC1Q92922 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SMARCC1Q92922 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC28.65■■■□□ 2.18
SMARCC1Q92922 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
SMARCC1Q92922 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
SMARCC1Q92922 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
SMARCC1Q92922 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC28.64■■■□□ 2.18
SMARCC1Q92922 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC28.64■■■□□ 2.18
SMARCC1Q92922 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC28.64■■■□□ 2.18
SMARCC1Q92922 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC28.64■■■□□ 2.18
SMARCC1Q92922 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC28.64■■■□□ 2.18
SMARCC1Q92922 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
SMARCC1Q92922 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
SMARCC1Q92922 AC135731.1-201ENST00000569415 2548 ntBASIC28.62■■■□□ 2.17
SMARCC1Q92922 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC28.62■■■□□ 2.17
SMARCC1Q92922 METTL26-203ENST00000397664 604 ntTSL 2 BASIC28.62■■■□□ 2.17
SMARCC1Q92922 AC006970.2-201ENST00000450065 779 ntBASIC28.62■■■□□ 2.17
SMARCC1Q92922 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC28.62■■■□□ 2.17
SMARCC1Q92922 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC28.62■■■□□ 2.17
SMARCC1Q92922 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC28.62■■■□□ 2.17
SMARCC1Q92922 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC28.62■■■□□ 2.17
SMARCC1Q92922 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC28.62■■■□□ 2.17
SMARCC1Q92922 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
SMARCC1Q92922 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC28.62■■■□□ 2.17
SMARCC1Q92922 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC28.62■■■□□ 2.17
SMARCC1Q92922 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
SMARCC1Q92922 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
SMARCC1Q92922 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
SMARCC1Q92922 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
SMARCC1Q92922 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC28.61■■■□□ 2.17
SMARCC1Q92922 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC28.61■■■□□ 2.17
SMARCC1Q92922 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
SMARCC1Q92922 CROCCP5-201ENST00000436658 830 ntBASIC28.61■■■□□ 2.17
SMARCC1Q92922 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC28.61■■■□□ 2.17
SMARCC1Q92922 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC28.61■■■□□ 2.17
SMARCC1Q92922 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC28.61■■■□□ 2.17
SMARCC1Q92922 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
SMARCC1Q92922 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
SMARCC1Q92922 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
SMARCC1Q92922 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
SMARCC1Q92922 AC068587.7-201ENST00000641602 218 ntBASIC28.6■■■□□ 2.17
SMARCC1Q92922 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
SMARCC1Q92922 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
SMARCC1Q92922 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
SMARCC1Q92922 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
SMARCC1Q92922 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
SMARCC1Q92922 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
SMARCC1Q92922 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC28.59■■■□□ 2.17
SMARCC1Q92922 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC28.59■■■□□ 2.17
SMARCC1Q92922 AL109923.1-201ENST00000618799 583 ntBASIC28.59■■■□□ 2.17
SMARCC1Q92922 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
SMARCC1Q92922 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
SMARCC1Q92922 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
SMARCC1Q92922 ABHD17AP1-201ENST00000358206 933 ntBASIC28.58■■■□□ 2.17
SMARCC1Q92922 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms