Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.56■□□□□ 0.56
RTN4IP1Q8WWV3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
RTN4IP1Q8WWV3 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RTN4IP1Q8WWV3 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RTN4IP1Q8WWV3 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RTN4IP1Q8WWV3 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTN4IP1Q8WWV3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTN4IP1Q8WWV3 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.55■□□□□ 0.56
RTN4IP1Q8WWV3 AC004448.1-201ENST00000458332 883 ntBASIC18.55■□□□□ 0.56
RTN4IP1Q8WWV3 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.55■□□□□ 0.56
RTN4IP1Q8WWV3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.55■□□□□ 0.56
RTN4IP1Q8WWV3 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RTN4IP1Q8WWV3 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.55■□□□□ 0.56
RTN4IP1Q8WWV3 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.55■□□□□ 0.56
RTN4IP1Q8WWV3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTN4IP1Q8WWV3 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.55■□□□□ 0.56
RTN4IP1Q8WWV3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTN4IP1Q8WWV3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.55■□□□□ 0.56
RTN4IP1Q8WWV3 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.55■□□□□ 0.56
RTN4IP1Q8WWV3 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
RTN4IP1Q8WWV3 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTN4IP1Q8WWV3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RTN4IP1Q8WWV3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTN4IP1Q8WWV3 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RTN4IP1Q8WWV3 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTN4IP1Q8WWV3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.55■□□□□ 0.56
RTN4IP1Q8WWV3 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTN4IP1Q8WWV3 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RTN4IP1Q8WWV3 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTN4IP1Q8WWV3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
RTN4IP1Q8WWV3 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTN4IP1Q8WWV3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.54■□□□□ 0.56
RTN4IP1Q8WWV3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTN4IP1Q8WWV3 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.54■□□□□ 0.56
RTN4IP1Q8WWV3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.54■□□□□ 0.56
RTN4IP1Q8WWV3 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RTN4IP1Q8WWV3 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RTN4IP1Q8WWV3 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
RTN4IP1Q8WWV3 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
RTN4IP1Q8WWV3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RTN4IP1Q8WWV3 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RTN4IP1Q8WWV3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTN4IP1Q8WWV3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.54■□□□□ 0.56
RTN4IP1Q8WWV3 AC021242.3-201ENST00000607598 1377 ntBASIC18.54■□□□□ 0.56
RTN4IP1Q8WWV3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTN4IP1Q8WWV3 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RTN4IP1Q8WWV3 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RTN4IP1Q8WWV3 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTN4IP1Q8WWV3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
RTN4IP1Q8WWV3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RTN4IP1Q8WWV3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RTN4IP1Q8WWV3 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTN4IP1Q8WWV3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.53■□□□□ 0.56
RTN4IP1Q8WWV3 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTN4IP1Q8WWV3 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTN4IP1Q8WWV3 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RTN4IP1Q8WWV3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTN4IP1Q8WWV3 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTN4IP1Q8WWV3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.53■□□□□ 0.56
RTN4IP1Q8WWV3 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.53■□□□□ 0.56
RTN4IP1Q8WWV3 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTN4IP1Q8WWV3 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.53■□□□□ 0.56
RTN4IP1Q8WWV3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTN4IP1Q8WWV3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTN4IP1Q8WWV3 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTN4IP1Q8WWV3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.52■□□□□ 0.56
RTN4IP1Q8WWV3 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTN4IP1Q8WWV3 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.52■□□□□ 0.56
RTN4IP1Q8WWV3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.52■□□□□ 0.56
RTN4IP1Q8WWV3 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.52■□□□□ 0.56
RTN4IP1Q8WWV3 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
RTN4IP1Q8WWV3 AC079630.1-202ENST00000618127 1840 ntBASIC18.52■□□□□ 0.56
RTN4IP1Q8WWV3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTN4IP1Q8WWV3 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RTN4IP1Q8WWV3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
RTN4IP1Q8WWV3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.52■□□□□ 0.56
RTN4IP1Q8WWV3 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.52■□□□□ 0.56
RTN4IP1Q8WWV3 Z92544.1-202ENST00000571933 1220 ntBASIC18.52■□□□□ 0.56
RTN4IP1Q8WWV3 AL451085.2-201ENST00000605085 799 ntBASIC18.52■□□□□ 0.56
RTN4IP1Q8WWV3 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RTN4IP1Q8WWV3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTN4IP1Q8WWV3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.52■□□□□ 0.56
RTN4IP1Q8WWV3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTN4IP1Q8WWV3 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTN4IP1Q8WWV3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTN4IP1Q8WWV3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RTN4IP1Q8WWV3 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
RTN4IP1Q8WWV3 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RTN4IP1Q8WWV3 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.52■□□□□ 0.55
RTN4IP1Q8WWV3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTN4IP1Q8WWV3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTN4IP1Q8WWV3 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
RTN4IP1Q8WWV3 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.51■□□□□ 0.55
RTN4IP1Q8WWV3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
RTN4IP1Q8WWV3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTN4IP1Q8WWV3 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RTN4IP1Q8WWV3 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RTN4IP1Q8WWV3 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTN4IP1Q8WWV3 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RTN4IP1Q8WWV3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms