Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC25.36■■□□□ 1.65
U2AF1L4Q8WU68 LHPP-203ENST00000392757 840 ntTSL 3 BASIC25.36■■□□□ 1.65
U2AF1L4Q8WU68 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC25.36■■□□□ 1.65
U2AF1L4Q8WU68 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC25.36■■□□□ 1.65
U2AF1L4Q8WU68 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
U2AF1L4Q8WU68 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
U2AF1L4Q8WU68 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
U2AF1L4Q8WU68 AC141586.4-201ENST00000624558 1573 ntBASIC25.35■■□□□ 1.65
U2AF1L4Q8WU68 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
U2AF1L4Q8WU68 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
U2AF1L4Q8WU68 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC25.35■■□□□ 1.65
U2AF1L4Q8WU68 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
U2AF1L4Q8WU68 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
U2AF1L4Q8WU68 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
U2AF1L4Q8WU68 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
U2AF1L4Q8WU68 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
U2AF1L4Q8WU68 AC006970.2-201ENST00000450065 779 ntBASIC25.34■■□□□ 1.65
U2AF1L4Q8WU68 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC25.34■■□□□ 1.65
U2AF1L4Q8WU68 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
U2AF1L4Q8WU68 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC25.34■■□□□ 1.65
U2AF1L4Q8WU68 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC25.33■■□□□ 1.65
U2AF1L4Q8WU68 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
U2AF1L4Q8WU68 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC25.33■■□□□ 1.65
U2AF1L4Q8WU68 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC25.33■■□□□ 1.65
U2AF1L4Q8WU68 HSCB-202ENST00000398941 955 ntTSL 2 BASIC25.33■■□□□ 1.65
U2AF1L4Q8WU68 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
U2AF1L4Q8WU68 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
U2AF1L4Q8WU68 AP005435.1-201ENST00000529293 1178 ntBASIC25.33■■□□□ 1.65
U2AF1L4Q8WU68 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC25.33■■□□□ 1.65
U2AF1L4Q8WU68 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC25.33■■□□□ 1.65
U2AF1L4Q8WU68 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
U2AF1L4Q8WU68 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC25.33■■□□□ 1.65
U2AF1L4Q8WU68 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
U2AF1L4Q8WU68 STX7-201ENST00000367937 1090 ntTSL 5 BASIC25.32■■□□□ 1.64
U2AF1L4Q8WU68 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
U2AF1L4Q8WU68 CROCCP5-201ENST00000436658 830 ntBASIC25.32■■□□□ 1.64
U2AF1L4Q8WU68 GALNS-213ENST00000569433 723 ntTSL 3 BASIC25.32■■□□□ 1.64
U2AF1L4Q8WU68 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
U2AF1L4Q8WU68 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
U2AF1L4Q8WU68 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC25.32■■□□□ 1.64
U2AF1L4Q8WU68 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
U2AF1L4Q8WU68 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
U2AF1L4Q8WU68 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
U2AF1L4Q8WU68 USF2-207ENST00000595068 1612 ntTSL 5 BASIC25.31■■□□□ 1.64
U2AF1L4Q8WU68 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
U2AF1L4Q8WU68 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
U2AF1L4Q8WU68 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
U2AF1L4Q8WU68 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC25.31■■□□□ 1.64
U2AF1L4Q8WU68 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC25.31■■□□□ 1.64
U2AF1L4Q8WU68 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC25.31■■□□□ 1.64
U2AF1L4Q8WU68 AP003733.4-201ENST00000623785 1697 ntBASIC25.31■■□□□ 1.64
U2AF1L4Q8WU68 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC25.31■■□□□ 1.64
U2AF1L4Q8WU68 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC25.31■■□□□ 1.64
U2AF1L4Q8WU68 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
U2AF1L4Q8WU68 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC25.3■■□□□ 1.64
U2AF1L4Q8WU68 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
U2AF1L4Q8WU68 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC25.3■■□□□ 1.64
U2AF1L4Q8WU68 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC25.3■■□□□ 1.64
U2AF1L4Q8WU68 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
U2AF1L4Q8WU68 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC25.3■■□□□ 1.64
U2AF1L4Q8WU68 DBI-210ENST00000542275 757 ntTSL 5 BASIC25.3■■□□□ 1.64
U2AF1L4Q8WU68 BID-214ENST00000617586 542 ntTSL 5 BASIC25.3■■□□□ 1.64
U2AF1L4Q8WU68 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
U2AF1L4Q8WU68 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
U2AF1L4Q8WU68 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
U2AF1L4Q8WU68 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC25.29■■□□□ 1.64
U2AF1L4Q8WU68 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
U2AF1L4Q8WU68 AC133637.1-201ENST00000624115 1537 ntBASIC25.29■■□□□ 1.64
U2AF1L4Q8WU68 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
U2AF1L4Q8WU68 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC25.29■■□□□ 1.64
U2AF1L4Q8WU68 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
U2AF1L4Q8WU68 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
U2AF1L4Q8WU68 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC25.28■■□□□ 1.64
U2AF1L4Q8WU68 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
U2AF1L4Q8WU68 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC25.28■■□□□ 1.64
U2AF1L4Q8WU68 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
U2AF1L4Q8WU68 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
U2AF1L4Q8WU68 NCF1B-203ENST00000435988 1254 ntBASIC25.28■■□□□ 1.64
U2AF1L4Q8WU68 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC25.28■■□□□ 1.64
U2AF1L4Q8WU68 CD99P1-205ENST00000527459 561 ntBASIC25.28■■□□□ 1.64
U2AF1L4Q8WU68 AC010525.1-201ENST00000585559 441 ntBASIC25.28■■□□□ 1.64
U2AF1L4Q8WU68 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
U2AF1L4Q8WU68 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
U2AF1L4Q8WU68 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
U2AF1L4Q8WU68 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC25.27■■□□□ 1.64
U2AF1L4Q8WU68 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
U2AF1L4Q8WU68 THRA-202ENST00000394121 2260 ntTSL 2 BASIC25.27■■□□□ 1.64
U2AF1L4Q8WU68 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
U2AF1L4Q8WU68 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
U2AF1L4Q8WU68 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC25.27■■□□□ 1.64
U2AF1L4Q8WU68 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
U2AF1L4Q8WU68 LINC01124-201ENST00000409786 2117 ntBASIC25.26■■□□□ 1.63
U2AF1L4Q8WU68 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
U2AF1L4Q8WU68 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC25.26■■□□□ 1.63
U2AF1L4Q8WU68 AC105233.4-201ENST00000642045 216 ntBASIC25.26■■□□□ 1.63
U2AF1L4Q8WU68 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
U2AF1L4Q8WU68 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
U2AF1L4Q8WU68 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
U2AF1L4Q8WU68 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC25.26■■□□□ 1.63
U2AF1L4Q8WU68 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms