Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SH3RF3Q8TEJ3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC26.5■■□□□ 1.83
SH3RF3Q8TEJ3 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
SH3RF3Q8TEJ3 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
SH3RF3Q8TEJ3 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC26.49■■□□□ 1.83
SH3RF3Q8TEJ3 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
SH3RF3Q8TEJ3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SH3RF3Q8TEJ3 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC26.49■■□□□ 1.83
SH3RF3Q8TEJ3 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
SH3RF3Q8TEJ3 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SH3RF3Q8TEJ3 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
SH3RF3Q8TEJ3 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
SH3RF3Q8TEJ3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
SH3RF3Q8TEJ3 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
SH3RF3Q8TEJ3 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SH3RF3Q8TEJ3 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SH3RF3Q8TEJ3 AP005435.1-201ENST00000529293 1178 ntBASIC26.48■■□□□ 1.83
SH3RF3Q8TEJ3 AC104564.3-201ENST00000582367 638 ntBASIC26.48■■□□□ 1.83
SH3RF3Q8TEJ3 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SH3RF3Q8TEJ3 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SH3RF3Q8TEJ3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SH3RF3Q8TEJ3 AC012414.1-201ENST00000556676 535 ntBASIC26.47■■□□□ 1.83
SH3RF3Q8TEJ3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC26.47■■□□□ 1.83
SH3RF3Q8TEJ3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SH3RF3Q8TEJ3 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
SH3RF3Q8TEJ3 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
SH3RF3Q8TEJ3 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SH3RF3Q8TEJ3 HACD1-201ENST00000326961 773 ntTSL 2 BASIC26.46■■□□□ 1.83
SH3RF3Q8TEJ3 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC26.46■■□□□ 1.83
SH3RF3Q8TEJ3 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC26.46■■□□□ 1.83
SH3RF3Q8TEJ3 YBX1P1-201ENST00000445822 960 ntBASIC26.46■■□□□ 1.83
SH3RF3Q8TEJ3 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC26.46■■□□□ 1.83
SH3RF3Q8TEJ3 AL358852.1-201ENST00000623174 1268 ntBASIC26.46■■□□□ 1.83
SH3RF3Q8TEJ3 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC26.45■■□□□ 1.83
SH3RF3Q8TEJ3 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC26.45■■□□□ 1.83
SH3RF3Q8TEJ3 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SH3RF3Q8TEJ3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
SH3RF3Q8TEJ3 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SH3RF3Q8TEJ3 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC26.45■■□□□ 1.82
SH3RF3Q8TEJ3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
SH3RF3Q8TEJ3 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC26.45■■□□□ 1.82
SH3RF3Q8TEJ3 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
SH3RF3Q8TEJ3 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
SH3RF3Q8TEJ3 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SH3RF3Q8TEJ3 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
SH3RF3Q8TEJ3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SH3RF3Q8TEJ3 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SH3RF3Q8TEJ3 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
SH3RF3Q8TEJ3 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SH3RF3Q8TEJ3 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
SH3RF3Q8TEJ3 AC027612.3-201ENST00000413684 1047 ntBASIC26.44■■□□□ 1.82
SH3RF3Q8TEJ3 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC26.44■■□□□ 1.82
SH3RF3Q8TEJ3 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC26.44■■□□□ 1.82
SH3RF3Q8TEJ3 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC26.44■■□□□ 1.82
SH3RF3Q8TEJ3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
SH3RF3Q8TEJ3 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SH3RF3Q8TEJ3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC26.43■■□□□ 1.82
SH3RF3Q8TEJ3 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
SH3RF3Q8TEJ3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC26.43■■□□□ 1.82
SH3RF3Q8TEJ3 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SH3RF3Q8TEJ3 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC26.42■■□□□ 1.82
SH3RF3Q8TEJ3 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC26.42■■□□□ 1.82
SH3RF3Q8TEJ3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SH3RF3Q8TEJ3 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC26.42■■□□□ 1.82
SH3RF3Q8TEJ3 PARL-206ENST00000435888 1098 ntTSL 5 BASIC26.42■■□□□ 1.82
SH3RF3Q8TEJ3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SH3RF3Q8TEJ3 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC26.42■■□□□ 1.82
SH3RF3Q8TEJ3 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC26.42■■□□□ 1.82
SH3RF3Q8TEJ3 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SH3RF3Q8TEJ3 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SH3RF3Q8TEJ3 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SH3RF3Q8TEJ3 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC26.41■■□□□ 1.82
SH3RF3Q8TEJ3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SH3RF3Q8TEJ3 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC26.41■■□□□ 1.82
SH3RF3Q8TEJ3 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SH3RF3Q8TEJ3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC26.41■■□□□ 1.82
SH3RF3Q8TEJ3 AL354811.1-201ENST00000610286 706 ntBASIC26.41■■□□□ 1.82
SH3RF3Q8TEJ3 RAB43-208ENST00000615093 783 ntTSL 5 BASIC26.41■■□□□ 1.82
SH3RF3Q8TEJ3 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC26.41■■□□□ 1.82
SH3RF3Q8TEJ3 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SH3RF3Q8TEJ3 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SH3RF3Q8TEJ3 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC26.4■■□□□ 1.82
SH3RF3Q8TEJ3 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SH3RF3Q8TEJ3 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC26.4■■□□□ 1.82
SH3RF3Q8TEJ3 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC26.4■■□□□ 1.82
SH3RF3Q8TEJ3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC26.4■■□□□ 1.82
SH3RF3Q8TEJ3 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SH3RF3Q8TEJ3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SH3RF3Q8TEJ3 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
SH3RF3Q8TEJ3 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
SH3RF3Q8TEJ3 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
SH3RF3Q8TEJ3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SH3RF3Q8TEJ3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SH3RF3Q8TEJ3 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC26.39■■□□□ 1.82
SH3RF3Q8TEJ3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
SH3RF3Q8TEJ3 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC26.39■■□□□ 1.81
SH3RF3Q8TEJ3 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC26.38■■□□□ 1.81
SH3RF3Q8TEJ3 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
SH3RF3Q8TEJ3 ANOS2P-203ENST00000472227 1816 ntBASIC26.38■■□□□ 1.81
SH3RF3Q8TEJ3 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms